Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00448 ATGGCTTCCTCCTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCACCCCAAGTTCAAAAAATGGATCACTGTTGGGAACCGCAAAAGCTTCTTTTCTCAGTGGAAGGAAACTGAAGACGAACAGTTTCACAGCACCAGTTGGAGCACGATCCAGCACTACAGTGTGTGCAGTTGCTGACCCTGATAGGCCTCTGTGGTTTCCAGGAAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCTGGAGATTTTGGTTTTGATCCTCTCGGTCTTGGATCTGATCCTGAGAGCTTGAGATGGAATGTTCAGGCAGAGCTTGTGCACTGCAGATGGGCCATGTTGGGTGCGGCAGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTGTCCTTAACACCCCTTCATGGTACACTGCTGGAGAGTTGGAGTACTTCACAGACACTACCACACTGTTCATAGTTGAGCTCTTTTTCATTGGGTGGGCTGAGGGTAGAAGATGGGCTGACATCATCAAACCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCATTTGGCTGGGGAAGTGGTTCTCCTGAGAAGATCAAAGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCGGGTCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTAA 810 0.4988 MASSCASSAIAAVAISTPSSKNGSLLGTAKASFLSGRKLKTNSFTAPVGARSSTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPFGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00448 269 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Vian9g00448 269 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Vian9g00448 269 SUPERFAMILY Chlorophyll a-b binding protein 59 267 - -
Vian9g00448 269 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Vian9g00448 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 267 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00448 Vian-Chr9 4440626 4441926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00448 45 269 Chloroplast and Mitochondria Gene Families AT3G61470 88.053 6.48e-149 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00448 K08908 - gmx:100784089 536.569