Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00404 ATGCTGAAGTCAGCGATCAAGAGATGGCCCTCATTGACCAAGCTCAGCCGCGGCAACAGCTGTGTCTCCTCCCACAAAGAAGCCACCAGAACATCCTCGTCATCCAAGGAACATGCACATGAACAAGAGCTTCATGCTGTTTATGTCGGCAAATCTAGGAGGCGCTACCTCGTAAACTCCGAAGTGATCGACCACCCTGTGTTCCAGGAGCTAGTGGATAGGTCTTCTTCGTCTCATGATGATGGGGTGGTGGTGTCCTGTGAGGTGGTGCTGTTCGAGCACTTGCTGTGGATGCTTGAGAGCGAAGAGACCCAGTTGGGGTCCATGGATGAGCTGGTCGAGTTTTACTCTTGTGCATGCTGA 363 0.5262 MLKSAIKRWPSLTKLSRGNSCVSSHKEATRTSSSSKEHAHEQELHAVYVGKSRRRYLVNSEVIDHPVFQELVDRSSSSHDDGVVVSCEVVLFEHLLWMLESEETQLGSMDELVEFYSCAC 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00404 120 PANTHER EXPRESSED PROTEIN 20 117 - -
Vian9g00404 120 MobiDBLite consensus disorder prediction 16 42 - -
Vian9g00404 120 Pfam Auxin responsive protein 8 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00404 Vian-Chr9 3920498 3921273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00404 46 114 Calmodulin-binding Proteins AT3G43120 28.767 3.15e-06 42.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00404 9 3920498 3921273 Vian9g00404 9 3920498 3921273 ECH