Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00403 ATGCCTTTCACAACTTATACTTACATTGCTGACCCTAATAATGTAGAACATGTACTCAAGACCAACTTCAATAATTATCCTAAGGGTAGAGTGTACCATTCATATATGAAAGTGCTTCTTGGAGATGGAATATTTAATGTTGATGGTGAGACTTGGAAGAAGCAAAGGAAAACTGCAAGCTTAGAGTTTGCATCCAGAAATTTAAGGGAATTTAGCACAAAAGTTTTCAGGGAATATGCCTTGAAACTTTCTGCTATTCTCATTCAAGCATCTATTCTTAACCAAGAAATAGACATGCAGGAACTGTTGATGAGAATGACTTTGGACTCCATATGTAAGGTTGGATTTGGAGTGGAAATTGGAACACTGTCTTCCAATTTACCAAAGAACAGTTTTGCTGATGCATTTGACACTGCAAATATCATAGTAACACTTCGTTTCATTGATCCACTTTGGAAGATTAAGAAAATGCTAAGTATAGGCTCTGAAGCAAAACTTGAGAAGAGTATCAAAGTTGTTGATGATTTCACCTACTCAGTAATTCGGAAAAGGAAGGCAGAGATAGAAGATGTCAGAAAAAGCGGGCAACAAAATCAGATGAAGCATGATATATTGTCAAGATTCATAGAACTAGGAGAAAGCAATGCAACGGACAAGAGTTTGAGAGATATTGTGTTGAACTTTGTCATTGCTGGTCGAGACACAACTGCAACAACCCTGTCATGGGCCATATACATGGTAATGACACATGCTCATGTTGCTGACAAACTTTACCTTGAGCTGAAACTTTTTGAGGAGAATCATGCAAAAGAAGAGAACATTTCCTTGCCTCAATTTGACAAAGAGGACTCAGAATCATTCAATCAAAGAGATCCTAAGGGCATATTAGAGGATGATGTATTGCCAGATGGAACCAAAGTAAAGGCAGGGGGAATGGTAACATATGTTCCATACTCTATGGGAAGGATGGAGTATAATTGGGGTTCTGATGCAGCTTCGTTTGTCCCTGAGAGATGGTTCAAAGATGGTGTTCTAAAAAATGAGTCTCCATTCAAATTCACTGCTTTTCAGGCAGGTCCTAGGATATGCCTTGGCAAGGACTCTGCATATCTGCAGATGAGGATGGTGCTAGCTATTTTGTGCAGATTTTACAAGTTCAAGTTGGTGCCAGGTCATACAGTGCAATATAGGATGATGACAATATTATCAATGGCTCATGGTTTGAAAGTTACCATACACAAACGATGTTAG 1251 0.3853 MPFTTYTYIADPNNVEHVLKTNFNNYPKGRVYHSYMKVLLGDGIFNVDGETWKKQRKTASLEFASRNLREFSTKVFREYALKLSAILIQASILNQEIDMQELLMRMTLDSICKVGFGVEIGTLSSNLPKNSFADAFDTANIIVTLRFIDPLWKIKKMLSIGSEAKLEKSIKVVDDFTYSVIRKRKAEIEDVRKSGQQNQMKHDILSRFIELGESNATDKSLRDIVLNFVIAGRDTTATTLSWAIYMVMTHAHVADKLYLELKLFEENHAKEENISLPQFDKEDSESFNQRDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGSDAASFVPERWFKDGVLKNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFKLVPGHTVQYRMMTILSMAHGLKVTIHKRC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00403 416 PRINTS P450 superfamily signature 354 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 PRINTS P450 superfamily signature 231 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 Pfam Cytochrome P450 293 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 Pfam Cytochrome P450 4 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 PRINTS E-class P450 group I signature 240 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 PRINTS E-class P450 group I signature 363 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 PRINTS E-class P450 group I signature 220 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 PRINTS E-class P450 group I signature 353 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 Gene3D Cytochrome P450 1 416 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 SUPERFAMILY Cytochrome P450 4 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian9g00403 416 PANTHER CYTOCHROME P450 6 410 - -
Vian9g00403 416 CDD CYP86A 4 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00403 Vian-Chr9 3910885 3913154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00403 1 415 Cytochrome P450 AT1G69500 69.281 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00403 K20495 - gmx:100787802 734.561