Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00401 ATGGCTAATGAAGGAAACAAAAGCAATGACTTCTATACGATCTTGGGGTTGAACAAGGAGTGCACTGAATTGGAGCTAAAGAATGCATATAAGAAACTTGCAAAGAAGTGGCACCCGGATCGTTGTGCTGCATCTGGGAATTCAGAGTTAGTGGAACAAGCTAAGAAGAAATTCCAGGAAATTGGGGAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTTGGTGTCTACGATAGTGATGACGACGAAAACGGCATGGGGGACTTTTTGGACGAAATGTTAACAATGATGAGTCAGACCAAATCAAATGAAAATGGAGAGGAGAGCTTTGAGGAGTTGCAACAGTTGTTTGAAGACATGTTTCAAGCTGATATTGGATTGGATGGAAGCCCCTCTCTTTCTTCTGCCGATTGCTCTAATTCATCTGCTTACATGACTTACAGTGAAAGTTCTAGTTCAAATAAACGCAATTCCACTGAGATGAAATTTGGGAAGGCAGAGGACTCCTCTGTCTTTGATACCAGTTACCAGAATTTCTGTTTTGGGGTTAGTATATACTGCATTTTGCTTATATTTCATTTGATACATCATATATCATCAATGGCATACACATGA 630 0.4016 MANEGNKSNDFYTILGLNKECTELELKNAYKKLAKKWHPDRCAASGNSELVEQAKKKFQEIGEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLDEMLTMMSQTKSNENGEESFEELQQLFEDMFQADIGLDGSPSLSSADCSNSSAYMTYSESSSSNKRNSTEMKFGKAEDSSVFDTSYQNFCFGVSIYCILLIFHLIHHISSMAYT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00401 209 PRINTS DnaJ domain signature 73 92 IPR001623 -
Vian9g00401 209 PRINTS DnaJ domain signature 53 73 IPR001623 -
Vian9g00401 209 PRINTS DnaJ domain signature 12 30 IPR001623 -
Vian9g00401 209 PRINTS DnaJ domain signature 30 45 IPR001623 -
Vian9g00401 209 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Vian9g00401 209 CDD DnaJ 10 70 IPR001623 -
Vian9g00401 209 SMART dnaj_3 9 73 IPR001623 -
Vian9g00401 209 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Vian9g00401 209 Pfam DnaJ domain 10 78 IPR001623 -
Vian9g00401 209 Gene3D DnaJ domain 7 134 IPR036869 -
Vian9g00401 209 PANTHER PUTATIVE, EXPRESSED-RELATED 2 177 - -
Vian9g00401 209 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00401 Vian-Chr9 3897197 3899500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00401 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 1.17e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00401 - - gmx:100791192 325.479