Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00388 ATGTCAAGTTTCCCCAACACAGTGTCGGAAGGCCGGAGGTTTGGCAAGGCGCCGGAAAAATCCTCTTTTTCTCAGACTTGCAGTCTCTTGAGCCAGTTCTTGAAGGAGAAACGAGCTTCTGGTGATTCCACCCTTGGAATGGGTGGGAAAATGGAACCTAAAGGTAGAAAGTGTGTGAAATTGCTTGTGATGAGAATTGCTGATGGGGGTGTTGTTTGTTTGGATTTGGAAATTCCAGCTAGTACGAAGGATTTGTTTGGCAGCCTGCAAAACTCAGATGGGGCTTTGAAACTAAGCGCTTCTGCCATGGATTTTCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGCCTAATCTTAGATCAGCGGTTCCTGAATCTCCTCAAATGACAATATTCTATGCTGGAAAAATGTTGGTATTCGATGCTTTTCCTCCGGAGAAGGCAACAGAGGTGATGAAGTTGGCCACCAAGCTGGCGTTGGACAGTTCCGGCGGCGAAGAAACTCCCCCGAGTGCTCCGGTTACCACCAAAGAATTGGCTGAGACCAAAGTGCCTCAGACAAACACCTCAGAAGCCCCTAAGCCAGGAAGCCAAGGGGTTGGTTCAGATATGAGGTATCCAAGAAGAGCTTCACTTCTAAAATTTCTTGAGAAAAGAAAAGAAAGGGTTAATGCGAGAGGGCCTTATCAAGTGAACAATCAGAAACCAGAGGGAAACAGTTCAGGTGGTGATCCTGAAGATCAGTCTTCTAAACAGTTTGACCTTAACTTGTAG 777 0.4646 MSSFPNTVSEGRRFGKAPEKSSFSQTCSLLSQFLKEKRASGDSTLGMGGKMEPKGRKCVKLLVMRIADGGVVCLDLEIPASTKDLFGSLQNSDGALKLSASAMDFLPQLVENPCIKKPNLRSAVPESPQMTIFYAGKMLVFDAFPPEKATEVMKLATKLALDSSGGEETPPSAPVTTKELAETKVPQTNTSEAPKPGSQGVGSDMRYPRRASLLKFLEKRKERVNARGPYQVNNQKPEGNSSGGDPEDQSSKQFDLNL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00388 258 MobiDBLite consensus disorder prediction 161 258 - -
Vian9g00388 258 MobiDBLite consensus disorder prediction 228 258 - -
Vian9g00388 258 MobiDBLite consensus disorder prediction 211 226 - -
Vian9g00388 258 Pfam tify domain 125 156 IPR010399 -
Vian9g00388 258 ProSiteProfiles Tify domain profile. 123 158 IPR010399 -
Vian9g00388 258 SMART tify_2 123 158 IPR010399 -
Vian9g00388 258 MobiDBLite consensus disorder prediction 181 197 - -
Vian9g00388 258 Pfam Jas motif 209 231 IPR018467 -
Vian9g00388 258 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 239 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00388 Vian-Chr9 3747346 3749204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00388 12 232 Tify Gene Family AT1G19180 33.191 3.97e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vian9g00388 tify 3.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00388 K13464 - gmx:100778559 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00388 9 3747346 3749204 Vian9g00388 9 3747346 3749204 ECH