Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00370 ATGCCTTCGAAGAGGCTTCAATGGAGATCCTTAATACTTGGTTGTTTTCAGGCCAAGGACCAACAACCCTTGGATGCTCCAAACATAGTTTCGAAAAAGTCTTCATCGAGTAGAATCTTCCTCTCTGATTTAAGCCTCAGCGATTATTCATCACTCTCTATCATGAGTGATTTGTCCAATTCTCTGGTGGGATCAAATCTGCGTATTTTCACCTACCAGGAGCTCAAGGAGATCACGCACAGCTTTAGCAAATCCAACATTCTTGGGGAAGGTGGGTTTGGTAAAGTGTATAAAGGCTTCATCGATGATAATTTTAAGCGTGGGTTGAAAGCTCAGGTTGTGGCAGTTAAAGCCTTAAACTTGGATGGAAAACAGGGTCACAGAGAGTGGTTGGCTGAAGTAATCTTTCTGGGGCAGTTGAAACATCGCCATCTGGTTAACTTAATTGGCTATTGCTGCGAAGATGAGCATAGGCTTCTTGTGTATGAATACATGGAGAGGGGCAATCTGGAGGAAAAGCTTTTCAAAGGTTATGTGGCAGCTTTGCCATGGCTAACGAGAATCAAAATAGCACTTGGGGCAGCTAAGGGACTTATGTTTCTCCATGAAGAAGAAAAACCAGTCATATACAGAGATTTTAAGTCCTCAAACATCCTACTAGACGCTGATTACAATGCCAAGCTCTCAGATTTTGGTTTAGCTATAGATGGACCAGAAAAAGATCAAACACACATTACAACTCGTGTTATGGGCACGCAAGGTTATGCAGCCCCTGAGTACATCATGACAGGCCATTTGACAACCATGAGTGATGTATATAGCTTTGGAGTTGTACTGTTAGAGCTCCTCACAGGAAAGAAATCCGTGGACAAAAAACGACCCAGCAGAGAGCAGGATTTGGTGGAATGGGCAAGGCCCTTGTTGAAGGATTCCTACAAACTGGAGAGAATAATGGACCCAAGACTCGAGGATCAGTACTCAAGTGAAGGGGCTAAAAAGTTTGCAGCTTTGGCTTACCAATGTTTGAGCCACCATGCAAAGGGTAGACCCACCATGAGAACAGTGGTTCGGACCTTAGAGCCTCTCTTGAAACTGAAAGACATCCCGGTTGGCCCTTTTGTGTATGTGGTGCCCAGTGAGGAAGACAAAGACATACCCAAAATGAGTGAAAAAGTAACAGAAAATGACCATGTTGTTGAGATCAACCAAATTGATGAGTTAAAACCCAAAGAAGAAGAAAAGGCAGAGAAAAAAGAAAAGGGTCACCACCGGCAACGAAGAAGTCGTCGCCACAAACGTCGTGTTAAGCCCCTGAGGTCTCAAGCCGTTTACTCTGACACTGCTCTGTACAAAACTCTTGGCACAAATCTTTACTCTCCCAAAGAAGCACAGTGA 1395 0.4394 MPSKRLQWRSLILGCFQAKDQQPLDAPNIVSKKSSSSRIFLSDLSLSDYSSLSIMSDLSNSLVGSNLRIFTYQELKEITHSFSKSNILGEGGFGKVYKGFIDDNFKRGLKAQVVAVKALNLDGKQGHREWLAEVIFLGQLKHRHLVNLIGYCCEDEHRLLVYEYMERGNLEEKLFKGYVAALPWLTRIKIALGAAKGLMFLHEEEKPVIYRDFKSSNILLDADYNAKLSDFGLAIDGPEKDQTHITTRVMGTQGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKKSVDKKRPSREQDLVEWARPLLKDSYKLERIMDPRLEDQYSSEGAKKFAALAYQCLSHHAKGRPTMRTVVRTLEPLLKLKDIPVGPFVYVVPSEEDKDIPKMSEKVTENDHVVEINQIDELKPKEEEKAEKKEKGHHRQRRSRRHKRRVKPLRSQAVYSDTALYKTLGTNLYSPKEAQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00370 464 Gene3D Phosphorylase Kinase; domain 1 53 164 - -
Vian9g00370 464 SUPERFAMILY Protein kinase-like (PK-like) 57 359 IPR011009 -
Vian9g00370 464 CDD STKc_IRAK 88 362 - -
Vian9g00370 464 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Vian9g00370 464 FunFam Serine/threonine-protein kinase BIK1 49 164 - -
Vian9g00370 464 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 165 368 - -
Vian9g00370 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Vian9g00370 464 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00370 464 Pfam Protein tyrosine and serine/threonine kinase 85 359 IPR001245 GO:0004672|GO:0006468
Vian9g00370 464 PANTHER OS01G0588500 PROTEIN-RELATED 42 362 - -
Vian9g00370 464 MobiDBLite consensus disorder prediction 420 438 - -
Vian9g00370 464 MobiDBLite consensus disorder prediction 401 419 - -
Vian9g00370 464 Gene3D Transferase(Phosphotransferase) domain 1 165 368 - -
Vian9g00370 464 MobiDBLite consensus disorder prediction 401 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00370 Vian-Chr9 3526916 3528867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00370 65 364 Receptor kinase-like Gene Family AT3G58690 51.961 3.83e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vian9g00370 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00370 - - gmx:100790454 761.911