Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00324 ATGTTGACTTGCATAGCTTGTACCAAACAGCTCAATAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAAGCTGTTCACACACCCAGCACAAAGCAAGCCATCAAGGCTCTCACTGCACAGATCAAGGACATGGCAGTGAAGGCTTCCGGGGCCTATAAGAGCTGCAGACCTTGTTCGGGATCTTCCAATGGTAACAGAAATAGGAAGTATGCAGACTCAGATATGGGGTCAGAGTCAGCCAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGAGGAAGGAAACAGAAGGTGGCAGGGTGAAAGGGCTTTCCAGTGGGGAAGGAACACCAGCTTCAGTGAGTGGACGCACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCACAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAAAGGATACGGTTCAGTCGTGAAATGTTCAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAGAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGTCACTCCTCCACTCAGCAAAGAGCGTGCACCCCGCTATTTTCACCACCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCAAATGCATCCTCACCCTTGTTATGAAACAAGTGGTCTGGCATCAACACCTAATCTTTCCAACATTAGTGCACCAAAGACTGAAAAATCATCCCTTGATGGTTCTGTAAGGACCAGTTCATCTGGTGAAGATCACTCAGGCGAGTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTCTACATCACTATCAGAGCACTGCCTGGTGGAACTAGAGAACTCAGGCGTGTTCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCAAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA 1107 0.4806 MLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDMGSESARFNWAYRRTGSSNSTPRMWRKETEGGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERAPRYFHHPMGMGYSSSDSLDHHQMHPHPCYETSGLASTPNLSNISAPKTEKSSLDGSVRTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00324 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Vian9g00324 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Vian9g00324 368 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Vian9g00324 368 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Vian9g00324 368 MobiDBLite consensus disorder prediction 200 312 - -
Vian9g00324 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Vian9g00324 368 MobiDBLite consensus disorder prediction 90 123 - -
Vian9g00324 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Vian9g00324 368 MobiDBLite consensus disorder prediction 265 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00324 Vian-Chr9 3072400 3075287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00324 1 368 Major Intrinsic Protein MIP AT1G31880 49.347 7.84e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00324 - - gmx:100805480 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00324 9 3072400 3075287 Vian9g00324 9 3072400 3075287 ECH