Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian9g00318 | ATGAGCATGAGAATGGCAGAGGAAGAATCTAGCGAGGAGGTTCATGTTCCGGGTGAGATTGATTGGCAAATGCTTGATAAATCCAAGTTCTTCTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTGCAACCCTTTACCCTGTTGTTGTGTTGAAGACTAGGCAGCAAGTGGCACAGTCCCAAGTGTCTTGCATAAACACTGCATTTTCGTTGATTAAGGGTGAGGGTTTTAGAGCATTGTACCGTGGGTTTGGGACTTCTTTGATGGGTACAATCCCTGCCAGGGCTCTTTACATGGCTGCATTAGAGGTTACCAAAAGCAATGTGGGCACGGCCACTGTTAGGTTTGGGCTTGGTGAACCTACTGCTTCTGCAGTTGCCAATGCAGCTGCTGGCTTGAGTGCGGCCATGGCAGCTCAGCTTGTGTGGACCCCTGTTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGCTGTTGTGATTCTAAAAATCCAAAGGCTTCGGCATTTCGGTACATCAATGGGATTGATGCCTTCAGGAAGATATTGAGCAATGATGGCCTTAGGGGCTTGTATAGGGGTTTTGGGATCTCAATTTTGACCTATGCCCCTTCAAACGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTCTGGGGTGGAGTAGGGTACTACTTGAGCAAGGGCAATGATAATGCAACTAACAGTGCTTTGAGGCCTGATACAAAAACCATGATGGCAGTTCAGGGAGTCAGTGCAGCAGTGGCTGGTGGCATGTCTGCTTTGATCACCATGCCACTGGACACCATCAAGACAAGACTGCAGGTCTTGGATGGCGACGAGAACGGCCGTCGTGGACCCACCATTATGCAGACAGTGAGGAGTCTGGTCAGGGAAGGTGGTTGGATGGCTTGTTACAGAGGATTGGGTCCTAGGTGGGCATCAATGTCAATGTCTGCAACAACAATGATCACTACTTATGAGTTCCTCAAACGGCTCTCAGCGAAGAACCAAGAGGTTTTAACATAA | 1032 | 0.4864 | MSMRMAEEESSEEVHVPGEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCINTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRFGLGEPTASAVANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGCCDSKNPKASAFRYINGIDAFRKILSNDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLSKGNDNATNSALRPDTKTMMAVQGVSAAVAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTIMQTVRSLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian9g00318 | 343 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 7 | 340 | - | - | |
Vian9g00318 | 343 | PRINTS | Mitochondrial carrier protein signature | 191 | 209 | IPR002067 | GO:0055085 | |
Vian9g00318 | 343 | PRINTS | Mitochondrial carrier protein signature | 83 | 103 | IPR002067 | GO:0055085 | |
Vian9g00318 | 343 | PRINTS | Mitochondrial carrier protein signature | 31 | 44 | IPR002067 | GO:0055085 | |
Vian9g00318 | 343 | PRINTS | Mitochondrial carrier protein signature | 254 | 276 | IPR002067 | GO:0055085 | |
Vian9g00318 | 343 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 218 | IPR018108 | - | |
Vian9g00318 | 343 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 245 | 334 | IPR018108 | - | |
Vian9g00318 | 343 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
Vian9g00318 | 343 | Pfam | Mitochondrial carrier protein | 248 | 338 | IPR018108 | - | |
Vian9g00318 | 343 | Pfam | Mitochondrial carrier protein | 37 | 108 | IPR018108 | - | |
Vian9g00318 | 343 | Pfam | Mitochondrial carrier protein | 123 | 219 | IPR018108 | - | |
Vian9g00318 | 343 | SUPERFAMILY | Mitochondrial carrier | 23 | 331 | IPR023395 | - | |
Vian9g00318 | 343 | Gene3D | Mitochondrial carrier domain | 30 | 341 | IPR023395 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian9g00318 | Vian-Chr9 | 3011305 | 3012336 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian9g00318 | 1 | 340 | Chloroplast and Mitochondria Gene Families | AT1G72820 | 73.913 | 0.0 | 506 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian9g00318 | K15121 | - | gmx:100784616 | 593.193 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian9g00318 | 9 | 3011305 | 3012336 | Vian9g00318 | 9 | 3011305 | 3012336 | ECH |