Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00286 ATGACACGGGGGAGGATAAGGGCGAGGCTCCGGAGGAGCAATCTTTACACATTTGGTTGCCTTAAGCCTTCTACTCTTGAGGATGCACCTCATCCACTTCAAGGTCCCGGGTTCTCGCGTACTGTGTACTGCAATCAGCCTCTTCTTCATGAAAGGAAGCCTCTATATTACTGCAGGAATGATATATCCACGACTAAGTACAATGTTCTTACGTTTGTCCCCAAGGCACTCTTTGAACAATTCCGTAGGGTTGCTAATATATACTTCCTTTTGGCTGCGTGTCTCTCGGCCTCTCCAATTTCACCTTTCAGCCCACTCAGCATGATTGCTCCTTTGGCATTTGTTGTAGGGCTCAGTATGGCAAAGGAAGCATTGGAAGATTCTCGTAGGTTCGTTCAGGATGTCAAAGTTAATCGCCGAAAGGTTAATCGTCATAAAAGCGATGGTATTTTTGGTCCCAGGTCGTGGCAGACCATTATGGTTGGGGATGTAGTAAAAGTGCAAAAGGATCAATTTTTTCCAGCTGATTTGCTTCTGTTGTCATCGAGTTATGAGGATGGGATATGCTATGTGGAGACTATGAATTTAGATGGTGAGACAAACTTGAAGGTGAAACGATCTTTGGAGTCTACCTTGAATCTAGACAATGACGAAGTTTTTAAAGATTTCACTGGAACAATACGTTGTGAAGACCCAAACCCGAATCTTTATACATTTGTTGGAAACTTAGAGTATGAGCGCCAGATTTATCCTCTTGATCCTAATCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGAGTACATCTATGGGGTGGCCATTTTCACTGGTCATGACAGCAAAGTCATGCAAAATTCTACAAAATCTCCTTCCAAACGAAGCACAATAGAAAAGAAGATGGATTATATTATATACACCCTCTTCACTGTCCTTATTTTGATATCTGTTATTAGTTCCATAGGATTTGTCATCAAGACTAAGTACCAAACCCCAAGTTGGTGGTATTTACGGCCGGACGATATAGAATACCAGTATGATCCCAAAAAAGTTGGAGTAGCTGGAATGAGTCATTTGATTACTGCGCTCATTCTTTATGGATATTTGATACCCATTTCACTTTATGTTTCCATCGAGGTTGTAAAGGTTTTACAGGCTACCTTCATCAACCAAGACATTCAAATGTATGATGACGATACTGGAACTCCAGCTGATGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACTATCTTGTCAGATAAAACTGGAACTTTGACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTACTGCATATGGTGTGCGCCCCAGTGATGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATATTGAGGAACCTGATTCAGATCTCTCCAATTTTCCCCTGCCTAAGGCTAAAGTGCGAGTTTCATGGGATGATGTTAAAAAAGATGAAGAAATTGGACTGGAGGCTGTTGTCACTTCCAAAGGAGACGAGGATCAAAAGCATGCCATAAAGGGATTTGGTTTTGAAGATGACCGTCTCATGAATTGTAATTGGTTGAAAGAGCCCAATGCTGACGACCTTTTGATGTTCTTCCGAATCCTAGCAGTTTGCCACACCGCCATTCCCGAGCTGAATGAGGAGACTGGTGTTTATACATATGAAGCCGAGTCACCCGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGCTTTGAGTTTTGCAGAAGGACTCAATCAAGTATTTTTGTTCGTGAAAAGTTTTCTGCTTCTAGACAAGTGGTTGAAAGAGAGTACAAACTTTTGAATCTGCTGGATTTTACTAGTAAAAGAAAACGTATGTCAGTGATCGTGCGTGATGAGGAGGGCAGTGTCTTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGCATGTCAAAGAATGGAAAAAAGTATTTAGAGGCTACTACCAAGCATCTAAATGATTACGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTATAGAAAGCTTGAGGAACAAGAATACTCGGCTTGGAATAATGAATTTCAGAAAGCCAAAGCATCTGTTGGAGCTGAAAGAGATTCAATGCTTGAGCGAGTATCAGATATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTACAGAATGGGGTTCCCCAATGTATTGATAATCTTGCTCAAGCTGGTCTTAAGATCTGGGTGTTGACAGGTGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGCAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACTACTCCGGTCACAGATTCTGTAACCACTGATGTCAAACAGGCCATCAAGGATAACATTTCGAACCAACTCACCAATGCTTCCCAAATGATAAAACTGGAGAAGGATCCTCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATACTTTAGAAGATGATATGAAGCACCAATTTTTGGCATTGGCAGTTGATTGTGCATCTGTCATCTGTTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTAGTGAAACAAGGTACTAGAAAGACTACTTTAGCAATAGGTGATGGCGCAAATGATGTTGGGATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTGGAAGGTATGCAGGTCAGTGGCTTACAGGACCGACTCAAGCCTGCAACTTTCTTCCAGGCAGTGATGGCTAGTGACTTTGCGATTGCCCAATTTCGATTTCTAGAGAGGCTTCTGGTAGTCCATGGACATTGGTGTTACAAGAGAATCGCACAAATGATATGTTATTTCTTCTACAAGAATATTGCATTTGGCCTCACCATCTTCTATTTTGAGGCTTTCACAGGCTTCTCTGGTCAATCAGTTTATGATGACTGGTATATGATATTGTTCAATGTTGTTCTGACATCATTACCTGTTATTTCACTCGGTGTTTTTGAACAAGATGTTCCATCAGAAGTTTGTTTACAGTTTCCTGCACTGTATCAACAAGGACCCAGGAATTTATTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCTTCACTCATCATCTTCTTTCTCGTCGTCACCATCTTCTACGACCAAGCATTTCGTGGTGATGGCCAGGTAGCTGACATGGCTGTTGTTGGAACCACTATGTTCACTTGCATCGTCTGTACTGTCAACTGTCAGATTGCGTTGACAATGAGCCACTTTACATGGATTCAGCACCTGTTTGTATGGGGAAGCATATCCACTTGGTACATCTTTCTAATATTGTATGGAATGCTTACTCCAGAATATTCCAAGAGTGCCTACCAAATACTGGCTGAAGCTCTTGGTCCTGCGCCTAATTATTGGATAGCAACCATTTTAGTTACAGTTACTTGTAATCTTCCTTATTTTGTCCACATTTCCTACCAAAGATGTTTTTATCCCATGGATCATCACATTATCCAAGAAATTAAGTACTACAAAAAGGATATTGAAGACCAACACATGTGGACAAGGGAGCGTTCTAAAGCCAGACAGGAAACCAAGATTGGTTTCACCGCAAGAGTGGAAGCAAAGATCAGGCAACTGAAGGCAAGGCTGCAGAAAAAGCAATCTTCCATGACTATTACAGCCCCATCGTGA 3720 0.4177 MTRGRIRARLRRSNLYTFGCLKPSTLEDAPHPLQGPGFSRTVYCNQPLLHERKPLYYCRNDISTTKYNVLTFVPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNRRKVNRHKSDGIFGPRSWQTIMVGDVVKVQKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLESTLNLDNDEVFKDFTGTIRCEDPNPNLYTFVGNLEYERQIYPLDPNQILLRDSKLRNTEYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISVISSIGFVIKTKYQTPSWWYLRPDDIEYQYDPKKVGVAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDDDTGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRPSDVELAAAKQMASDIEEPDSDLSNFPLPKAKVRVSWDDVKKDEEIGLEAVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLKEPNADDLLMFFRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFVREKFSASRQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSVFLMCKGADSIIFDRMSKNGKKYLEATTKHLNDYGEAGLRTLALAYRKLEEQEYSAWNNEFQKAKASVGAERDSMLERVSDMMEKELILVGATAVEDKLQNGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPVTDSVTTDVKQAIKDNISNQLTNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHQFLALAVDCASVICCRVSPKQKALVTRLVKQGTRKTTLAIGDGANDVGMIQEADIGVGISGVEGMQVSGLQDRLKPATFFQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWYRILGWMGNGLYSSLIIFFLVVTIFYDQAFRGDGQVADMAVVGTTMFTCIVCTVNCQIALTMSHFTWIQHLFVWGSISTWYIFLILYGMLTPEYSKSAYQILAEALGPAPNYWIATILVTVTCNLPYFVHISYQRCFYPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKARLQKKQSSMTITAPS 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00286 1239 Gene3D - 589 700 IPR023299 GO:0000166
Vian9g00286 1239 FunFam Phospholipid-transporting ATPase 118 288 - -
Vian9g00286 1239 Gene3D - 113 288 - -
Vian9g00286 1239 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Vian9g00286 1239 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Vian9g00286 1239 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Vian9g00286 1239 CDD P-type_ATPase_APLT_Dnf-like 59 1056 - -
Vian9g00286 1239 Pfam Phospholipid-translocating P-type ATPase C-terminal 924 1174 IPR032630 -
Vian9g00286 1239 NCBIfam phospholipid-translocating P-type ATPase 57 1182 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vian9g00286 1239 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Vian9g00286 1239 Gene3D - 720 933 IPR023214 -
Vian9g00286 1239 Pfam Cation transport ATPase (P-type) 546 651 - -
Vian9g00286 1239 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1173 IPR023298 -
Vian9g00286 1239 SFLD Haloacid Dehalogenase 405 947 - -
Vian9g00286 1239 SFLD p-type atpase 405 947 IPR044492 -
Vian9g00286 1239 FunFam Phospholipid-transporting ATPase 724 936 - -
Vian9g00286 1239 SUPERFAMILY Calcium ATPase, transduction domain A 146 286 IPR008250 -
Vian9g00286 1239 Coils Coil 1212 1232 - -
Vian9g00286 1239 FunFam Phospholipid-transporting ATPase 591 722 - -
Vian9g00286 1239 SUPERFAMILY HAD-like 410 907 IPR036412 -
Vian9g00286 1239 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 34 1200 - -
Vian9g00286 1239 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00286 Vian-Chr9 2586435 2592406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00286 1 1234 Primary Pumps ATPases AT1G17500 73.603 0.0 1909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00286 K01530 - gmx:100819559 2272.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00256 11 2464857 2470716 Vian9g00286 9 2586435 2592406 PCT