Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian9g00285 | ATGGAGATGGAGAGGTACACCAGTCAGCGGTGGAGACCTACTGACGATCAGGTCAAGATGATGACCAGAATCTACAACTTTGGGGTCACACACCCAAGCAGAGCGCAAGTTGTCGAGATCGCGTCTCGACTAAGGACCTTCGCAGATGCCAGCGAATACAACGTGCACTGCTGGTTCAACAATCATGGCAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGTTTTCACAACTGCCGCTATACATGTATGAATACGACTGGGTGATCATGAGGGCGCCGAGGCTGCTGAACTTGTTCCCCGTTCCGATCATCATTGACGACGACAGGGACGGACGACAAATCGCTCCACCCATGCTTCTCACATTCCGGACCAGAGCCCCCTCGACAGAGCTCTCCCTTAGACCACCACAACCGGCTCGGGAATTTTTTCGCTGA | 450 | 0.5444 | MEMERYTSQRWRPTDDQVKMMTRIYNFGVTHPSRAQVVEIASRLRTFADASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYDWVIMRAPRLLNLFPVPIIIDDDRDGRQIAPPMLLTFRTRAPSTELSLRPPQPAREFFR | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian9g00285 | 149 | Pfam | Homeodomain | 8 | 68 | IPR001356 | GO:0003677 | |
| Vian9g00285 | 149 | Gene3D | - | 8 | 73 | - | - | |
| Vian9g00285 | 149 | SUPERFAMILY | Homeodomain-like | 9 | 70 | IPR009057 | - | |
| Vian9g00285 | 149 | PANTHER | WUSCHEL-RELATED HOMEOBOX 13 | 7 | 72 | IPR044559 | GO:0003700 | |
| Vian9g00285 | 149 | ProSiteProfiles | 'Homeobox' domain profile. | 4 | 69 | IPR001356 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian9g00285 | Vian-Chr9 | 2561445 | 2561994 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vian9g00285 | 7 | 72 | Wox Gene Family | AT5G59340 | 37.879 | 6.43e-11 | 57.0 |
Transcription factors information