Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00284 ATGAGTTACTCCACGAAAAAGCACGACGTGTTCGTGAGCTTCAGAGGGGAGGACACACGAACCAACTTCACTAGCCATCTTTACAAAGCTCTCGAAGATAAATCAATCGGAGCTTACATAGATCGCCAGCTAGACAGAGGAGAAAGTGTCTGGCCGGCACTTGCCAAAGCAATTCGGGACTCACATGTCTCAATTGTTGTTTTCTCTGAAAACTATGCTTGTTCCAAATGGTGTCTGGAAGAGCTGGTGAAAATTCTTGAATGCAGAAAAGAACTGGGTTTGGTAGTTATACCTGTCTTTTACAACATAGATCCATCAGACATAAGGAATCAGAAAGGTACTTACGAGAAGGCATTGGCAGAACTGTTGGAATCCGATGAAGAGAAAGGGCCAAAGTGGAAAGCTTCTCTCACTGAAGCAGCCAATATATCTGGATGGGACTCTAGGACACATAGGGACGAAGCTCATGTCATTGAGAATGTTGTCAATGATGTATTGCAAAAGCTTCATCTGCGATGCCCTACTGAATTAAAGGGCCCTGTTGAAAATGAAGAAAATTGCAGAAATGTAGAATTATTACTAAAATCATGTAGGGTCATTGGAATTTGGGGTATGGGTGGAATTGGCAAGTCCACCATTGCTAAAATCTTGTTTGCTAAACACTTTCCCCAATATGACCATGTCTGCTTTGTGACCAATGCAAAAGAATATTCGCTAGACAAGCTTTTCTCTACCATATTGAAGGAGGAGGTTTCCGCAAAAAATGTCGTAGGGTCATCGTTTCATATGAGGAGACTCAGAAGTAAAAAGGTTTTCATTGTACTTGATGATGTTGACATGGATAGTTTTGAGCCATTGGAGTATTTATGTGGGGAGTATGAAGGCCAGCATAGTGATAGTAAACTCGTTATAACAACAAGAGATAGGCAATTGCTTGTTGGAAGGGTTGATGCGATATACGAGGTTCAGAAATGGAAGAAAACAGAATCTCTGAAGCTTTTTTGCTCAGAATCCTTTAAGAAAAGTTATCCCGAAGGAGGTTATGAGAGTCTCTCAGAAAGTGCAGTTGAATATGCTGGTGGCGTTCCATTTGCCCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCAGTTTTTGGGAAAGTACTATAAGAAAACTCAGCTTGTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAATGAGCTACACTGGATTGCATGATCTAGAAAAAAATATTTTTCTAGACATTGTATTTTTCTTTAGAGAAAAACAGGAAGATCATGCCACACGGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGAATAGAAGTTCTCGCAGACAAATCTTTGTTAACAATTTCATATACAAATATAATACAAATGCACGACTTGCTGCAACAAATGGGTTTGGAGATTGTACGTCAAGAATGTAGAGCAGATCCTGGCAGACGTAGTCGCTTGAAGGATAATGAAGCTCGTGAAGTGATTGAAGAAAACAAGGGAACTGAAGCAATTCAAGGAATAGAACTGGATTTGTCTCAAGCTAAAAATTTACGTTTGCGTTCTGACACATTGACGAAGATGAAAGCTTTAAGATTTCTGAGATTCTATAACTCCTCTGGTCAGAGTTCTTGGAATACATACCTCGACCTTCCTGCAACTCTTGAGCCGTTTTCTGATAAACTAAGGTACATTGAGTGGATTGGATACCCTTTTGAGTGTCTTCCATCACCTTTTTGTGCAAAGTTTCTTGTTGAGATTCACATGCAACATGGCAAAGTTAAACAACTTTGGCAGGGAATCCAGGAACTAGATAACTTAGAGGGAATTGACCTAAGTGGATGCAAACAGTTTGAAGAGCTTCCAGATTTGTCTAAGGCGCCAAGACTTAAATGGGTGAATCTCTCATGTTGTGAAAGTTTGCGGTATCTTCACCCGTCTGTTTTATCCTCGGCCACGCTTGTTACTTTGATACTGAATGGGTGTACAAAACTCGAGAGTGTTAAAGGTGAAAAGCGTTTAAAATCTCTAGAGAAGATCAGTGTCAATGGCTGCTTAAGTCTGGAGGAATTTGCAGTGTCATTAGATTTAATTAAAATATTGAATGTGAGCAATGCACCAGTAAGGCGAATGGGAAAACTCAAGAGCCTCAATTTAGAGGAGTTTCCAAGATCCCTTCGTCGTTGGTTGGAACTTGTCAAGACTACGGTGAGCCACCACCTCAAACATTCGTACGTGCTAAAGTTAGATCAATACGATGGGACAACGTTGCCTGAATTCATTAAGAATTCCGGAAACTTGAGAATTTTGTCCGTGGAGAATTGTGACTTGTTGATGCATCTTCAAAAGCTTCCATCCAGCATCGGTTACTTAGGTGTCATTAACTGCACTTTACTGGTGTCAGTGTCAGACTTAGTCAATTTGGCAAATGTGATGCGGGGAAGTACCAGATTCATTACATTCAAGAACTGCTTGAAATTGGATGAACATTCATGCAGACTTATAATGAAGAGCGTAAAGTTAATAATGGTGTGTTCTGCATTTGACAACCTGGTGAGAAAATCCTGTGACGTCCGCGACTACAGTTATAACAGTGTTGAGCTTTGTTTGCCAGGAAGAAAGGTCCCACAAGAGATTAAATATCGGAGCACCGAGTCCTTCATTACCATTGACCTTCCCAAACTTTCCAACTTGAGGGGCTTCATTTACTCTGTTGTTCTTTCTCCATCTGGTGAAATGAAGAAGCATGACACCAAGATTATATGTAAACGCCACTTGAGACAAAATACGAGGGAATCATGGGTATATAGTGATATCGAGGGCTTGAACACCGATCATGTTTATATATGGTATGATCCATTCCACAGTGATGGCATTCTCAAATATAATGAGCCAAGTGTTTCTTTTGAGTTCTGTGTTAGAAATGATAAGGGGGAAGTTGATGGCTCTATGTTTATTAAAGAGTGTGGTGTTGGCCTTATAAGTGTTTCAGAACTGCCGAGTGTTTTAGAAGAGTTGGACTGGCACTCGGATAAGAAGAAGGACTTAGTGAATAGAGTGGAGTTGATTACAGGACAAAGGATAACCTTAACATCAATTGAACAATCCGATGAGAGGAAAAACCATTTTTCTGCTTTGGAAGAGATTATCAATTCTACTCACAAGGAAGCCAAAATTGATTCTGGGCAGAATACTACAAAATCTACTTATGCGGTCAAATATGAAGGAAATAGAGAAACGTCAATCAAACAAGATGCAACATTGCCTGAAACTGTTGAATCGGAGTTAGACAAAGAAAATGAATCTAAAGAAAAGTCAAAATCAGTTGAAGACAACAGAGGGAGTAAAGAATATTTTTCTGGTATCGAAGAGAACATTGAATATTGTGCTAGCAGTGCAACCAACGCAACTACTGAAAGAGGTCCCGAAGAAAAATCTACAAAGTCTACGGAAACTGTAGCCAATGAACATTCAGAGAGGTTGGAAGAATCGATTGAGGAAGTTGTAAAAATTCATGATACAGACAACTCTATTATTAAATGCTCATCCTTGGACCTTGAGAATTGCCTCCAACAGTTCGATGAAAATCCATTTGCAATCTTTGACTTACTTTCTTCTGAACTATCCCCTTCACTGAAACAATCAAGTGATGCTACAACCCTCCTCAATGAGTTCCGAACCTTAGTGTTCTCTACTTCGTTGCTGAAGAAAATTCCAGACCAATCCTATCTGCAACAAGTTACAGAATCACTACAGAAACTTCAAACTTATCGTGGAAAAATTACAAAAGAGCAAGAAGCTGGTTTAGACACATTTATAGAGCTCTACAACAAAGCTGTCGACATTTCTCAAGGTAAGATGTTAACCGAGGATAACCAAGCAAAACTGGCATCTGAGAAGAGAGACTTGTACAACAAACTTGAACATTCTAAACTGAAAGTTCAACAGTTTGACACTACCATCTTAACTTATAAATCTCAGAGGGAAAACCTACAAAAGAGACAAAGGGAAATCCAGGAAGCTATAAAAGAGCTTCAACAAGAAAATGAAGCCTTGGAAAAGGATAGCTCAACACTAGAAGTTTTATACTCTGAACAACAAACCAAGAAGAAGGAAACACTTGAATCAGTGAAGTGTATCTCGATTTCTGTTGTTCAAACTACCAAACAATTAGAAGAAGTTGAAAAGAAAAGATTGAGTTTGGCTTCAGCTTACGAAGGCCTCGAAGAGCCATATGGAAGAATGAAGACAAAACCCCCATTTTAG 4275 0.3937 MSYSTKKHDVFVSFRGEDTRTNFTSHLYKALEDKSIGAYIDRQLDRGESVWPALAKAIRDSHVSIVVFSENYACSKWCLEELVKILECRKELGLVVIPVFYNIDPSDIRNQKGTYEKALAELLESDEEKGPKWKASLTEAANISGWDSRTHRDEAHVIENVVNDVLQKLHLRCPTELKGPVENEENCRNVELLLKSCRVIGIWGMGGIGKSTIAKILFAKHFPQYDHVCFVTNAKEYSLDKLFSTILKEEVSAKNVVGSSFHMRRLRSKKVFIVLDDVDMDSFEPLEYLCGEYEGQHSDSKLVITTRDRQLLVGRVDAIYEVQKWKKTESLKLFCSESFKKSYPEGGYESLSESAVEYAGGVPFALKVLGSYLRSKGISFWESTIRKLSLYPNERIQKVLEMSYTGLHDLEKNIFLDIVFFFREKQEDHATRILDACGFEATSGIEVLADKSLLTISYTNIIQMHDLLQQMGLEIVRQECRADPGRRSRLKDNEAREVIEENKGTEAIQGIELDLSQAKNLRLRSDTLTKMKALRFLRFYNSSGQSSWNTYLDLPATLEPFSDKLRYIEWIGYPFECLPSPFCAKFLVEIHMQHGKVKQLWQGIQELDNLEGIDLSGCKQFEELPDLSKAPRLKWVNLSCCESLRYLHPSVLSSATLVTLILNGCTKLESVKGEKRLKSLEKISVNGCLSLEEFAVSLDLIKILNVSNAPVRRMGKLKSLNLEEFPRSLRRWLELVKTTVSHHLKHSYVLKLDQYDGTTLPEFIKNSGNLRILSVENCDLLMHLQKLPSSIGYLGVINCTLLVSVSDLVNLANVMRGSTRFITFKNCLKLDEHSCRLIMKSVKLIMVCSAFDNLVRKSCDVRDYSYNSVELCLPGRKVPQEIKYRSTESFITIDLPKLSNLRGFIYSVVLSPSGEMKKHDTKIICKRHLRQNTRESWVYSDIEGLNTDHVYIWYDPFHSDGILKYNEPSVSFEFCVRNDKGEVDGSMFIKECGVGLISVSELPSVLEELDWHSDKKKDLVNRVELITGQRITLTSIEQSDERKNHFSALEEIINSTHKEAKIDSGQNTTKSTYAVKYEGNRETSIKQDATLPETVESELDKENESKEKSKSVEDNRGSKEYFSGIEENIEYCASSATNATTERGPEEKSTKSTETVANEHSERLEESIEEVVKIHDTDNSIIKCSSLDLENCLQQFDENPFAIFDLLSSELSPSLKQSSDATTLLNEFRTLVFSTSLLKKIPDQSYLQQVTESLQKLQTYRGKITKEQEAGLDTFIELYNKAVDISQGKMLTEDNQAKLASEKRDLYNKLEHSKLKVQQFDTTILTYKSQRENLQKRQREIQEAIKELQQENEALEKDSSTLEVLYSEQQTKKKETLESVKCISISVVQTTKQLEEVEKKRLSLASAYEGLEEPYGRMKTKPPF 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00284 1424 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 171 - -
Vian9g00284 1424 Gene3D - 167 317 IPR027417 -
Vian9g00284 1424 MobiDBLite consensus disorder prediction 1084 1120 - -
Vian9g00284 1424 Gene3D - 2 166 IPR035897 -
Vian9g00284 1424 MobiDBLite consensus disorder prediction 1093 1120 - -
Vian9g00284 1424 SMART till_3 7 143 IPR000157 GO:0007165
Vian9g00284 1424 Pfam NB-ARC domain 198 399 IPR002182 GO:0043531
Vian9g00284 1424 SUPERFAMILY "Winged helix" DNA-binding domain 395 481 IPR036390 -
Vian9g00284 1424 PRINTS Disease resistance protein signature 199 214 - -
Vian9g00284 1424 PRINTS Disease resistance protein signature 265 279 - -
Vian9g00284 1424 PRINTS Disease resistance protein signature 605 621 - -
Vian9g00284 1424 PRINTS Disease resistance protein signature 359 373 - -
Vian9g00284 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 418 IPR027417 -
Vian9g00284 1424 Coils Coil 1324 1365 - -
Vian9g00284 1424 Gene3D - 325 408 IPR042197 -
Vian9g00284 1424 Pfam TIR domain 7 172 IPR000157 GO:0007165
Vian9g00284 1424 Gene3D Ribonuclease Inhibitor 477 710 IPR032675 -
Vian9g00284 1424 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 146 IPR035897 -
Vian9g00284 1424 MobiDBLite consensus disorder prediction 1136 1164 - -
Vian9g00284 1424 SUPERFAMILY L domain-like 479 806 - -
Vian9g00284 1424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 820 IPR044974 GO:0006952
Vian9g00284 1424 ProSiteProfiles TIR domain profile. 6 169 IPR000157 GO:0007165
Vian9g00284 1424 MobiDBLite consensus disorder prediction 1144 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00284 Vian-Chr9 2544160 2550686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00284 4 803 WRKY Transcription Factor Family AT4G12020 30.325 5.55e-77 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00284 - - vun:114166184 2310.8