Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00283 ATGTTGGGCACATCAATAGGGAGTATGCATAAACTTAAGTCGCTCAATCTGGAGGGCTTAAAACTCAAGCATGTTTTAAAAGAGTTATCTTTCTTGACATCGCTCAAGGTGCTGAAGATTTCTGATAATGGACTAGTTATTGACAAACAGCAAATACATGTCCTGTTTAGTGGATTAAGGTACTTACAAATACTATATTTGAAAGATTGTAGTAAATTGTTTGAACTCCCCGACAACATCAGTCTCTTAACCCAATTACAGGAACTAAGATTAGACAGAAGCGATTTGAAAAGGTTGCCTGAAAACATTAAGAATCTTAAAATGTTGGAAATTCTGTCCCTGGAGGATTGCAAGGAGCTTCTTTGCCTGCCAACGTTTCCATCCCTCATCAAGTACTTACGTGTCATTAACTGCACATCATTGGTGTCAGTGTCAAACTTAAAGACTTTGGCAATAGAGATGTTGGGAGTGACCAAACGAACTACATTCAAGAATTGCGGGAAATTGGATGAAGATTCACTCAGAATTATTATGGAAAGCCTCCATTTAACAATGATGAGTGCTGCATATCACAATGTGTTAGTAAGAAAAACATATGGGACGTACAACAGCTGCAACTATACGAGTGTTGAGCTTTGTTTACCCAGAGGGAGTGTCCCTGAGCAGATTCATTATCGATCCACTCAGTCCTCCATTACCATTGTACTTCCTCCACGTTCTGAATTACTGGGCTTCATTTACTCAGTGGTTCTTTCTCCAGTTGGTGGAAAGAAGACTTTTGGCACTAAGATAATTTGTAAATGTCACTTGCCAGAAGAAGGTATAAAGGCAACATGGCTATATGGTGATATCAGGGGATTGAAGTCGGATCATGTTTATGTATGGTATGATCCATTACACTGTGACAGCATTCTCAAATATTATAAACAGTCAAAAGTTTGTTTTGAGTTCTGTGTTGCAAATGATAAGGGGGAAGTTGACGGTTCCATCTGTATTAAAGAGTGTGGGGTAGGGCTTGTAAATGTTGTAGAAATGCATAGTGTTTTACAAGAGTTGGATTTTGATTCGGATAAGAAAAAGGAGTTGGTGGAGGGAGTGGAGTCTGAATCAAAGCTTAGGAATCAACAACGAGATTGGAGTGAATCAAGCTCTTCAGATAGTCTAACAACTCCAAGGAGCTCCTCTGAGTCAGACTCAGAGATTGTTAAACCAGTTTCAGCTGAAAATGGTAAATCTACTCACAAGGAAACCAAAACTAATTCTGGAACAAGTGTGGTCAAATACAAAGGTAATAAAGAAGTGCCAAAATCAGATGCAACATTGCATGAGACCATGGAGTCACATTCAGACAATGAAAATCAGTTTAGAGAAAAGTCAGTCACACAATCAGAGGTAGTAGAGATGATTGAGCTAGAGAACACTGAATCTACTTGCAAGGAAACCCTGAGCATTGCTGGAAGAGGTCCCAAAGAAAAATCTAGAGAGTCTACAAAAATTGTGGCCGATGAACATTTACAGAGCACATCTCTTCAAGCCTCTTCCCAGGGGGGCTCTGAGCACTTGCATGATAGGTTAGAAGAATCGAATAAGCAAGTTGTACAAACTTATGATACAGAGAAATTTGTTACTAAATACTCGTACTTTGACCTTGAGAGTTGCCTCCAACAGTTGTATGAAAATCCATTTGCAATCCTTGACTTACTCTCTAATGAGCTATCCCCTCCTCTGAAACAATCAGAAACTTGTGTTCAAAAGGTAGCTCAAGCAAATGATGCTACAACCGTCCTCGATGAATTCCGAACCTTAGTGTTCTCAACTTCATTGCTAGAGAAACTTCCAGACCAATCCTATCGGCAACAAATTGAAGAATCACTACGAAAACTTCACGCTTATCGTAGAGAAATTACGAAAGAGCAAGAAGGTGTAGACAAATTTATCGAGCTATACGATAAAGCTGCCAACATTTCTCAAGAAAAGATGCTAACCGAGGATAAACAAATAAAACTGGCATCTAAGAAGAGAGACTTGTATAACAAACTTCAAGATTCTAAACTGAAAGTTCAACAGTTTGACACTGCCATCTCAACTAGTAAGTCTGAGATTGAAAACCTCCAAAAGAGACAAAGAGAAATCCAGGGAGCTATAAATAAGCTTCAACAAGAAAATGAAGCCTTGGAAAAGGAGAAGTCAGCACTAGAGGTTTTATACGCAGAAAAACAAACCAAGAAGAACGAAACACTTGAATTAGTGAAGCATATCTCGACTTCTGTTGTTTACACAATCAAGCAATTAGAAGAACTTGAAGAGAAAAGATTGAGTTTGGCTTCAGCTTACGAAGACCTCAAAGAGCCATATGGAAGAATGAAGACAAAGCCCCCATTTTAG 2385 0.3883 MLGTSIGSMHKLKSLNLEGLKLKHVLKELSFLTSLKVLKISDNGLVIDKQQIHVLFSGLRYLQILYLKDCSKLFELPDNISLLTQLQELRLDRSDLKRLPENIKNLKMLEILSLEDCKELLCLPTFPSLIKYLRVINCTSLVSVSNLKTLAIEMLGVTKRTTFKNCGKLDEDSLRIIMESLHLTMMSAAYHNVLVRKTYGTYNSCNYTSVELCLPRGSVPEQIHYRSTQSSITIVLPPRSELLGFIYSVVLSPVGGKKTFGTKIICKCHLPEEGIKATWLYGDIRGLKSDHVYVWYDPLHCDSILKYYKQSKVCFEFCVANDKGEVDGSICIKECGVGLVNVVEMHSVLQELDFDSDKKKELVEGVESESKLRNQQRDWSESSSSDSLTTPRSSSESDSEIVKPVSAENGKSTHKETKTNSGTSVVKYKGNKEVPKSDATLHETMESHSDNENQFREKSVTQSEVVEMIELENTESTCKETLSIAGRGPKEKSRESTKIVADEHLQSTSLQASSQGGSEHLHDRLEESNKQVVQTYDTEKFVTKYSYFDLESCLQQLYENPFAILDLLSNELSPPLKQSETCVQKVAQANDATTVLDEFRTLVFSTSLLEKLPDQSYRQQIEESLRKLHAYRREITKEQEGVDKFIELYDKAANISQEKMLTEDKQIKLASKKRDLYNKLQDSKLKVQQFDTAISTSKSEIENLQKRQREIQGAINKLQQENEALEKEKSALEVLYAEKQTKKNETLELVKHISTSVVYTIKQLEELEEKRLSLASAYEDLKEPYGRMKTKPPF 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00283 794 MobiDBLite consensus disorder prediction 507 529 - -
Vian9g00283 794 MobiDBLite consensus disorder prediction 377 402 - -
Vian9g00283 794 MobiDBLite consensus disorder prediction 365 434 - -
Vian9g00283 794 Gene3D Ribonuclease Inhibitor 1 176 IPR032675 -
Vian9g00283 794 Coils Coil 687 745 - -
Vian9g00283 794 PANTHER SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN 9 479 - -
Vian9g00283 794 SUPERFAMILY L domain-like 6 152 - -
Vian9g00283 794 Pfam C-JID domain 215 341 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00283 Vian-Chr9 2528660 2537006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00283 59 144 WRKY Transcription Factor Family AT4G12020 33.721 5.67e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00283 - - vun:114165831 1339.71