Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00264 ATGAACAACAATAACAACAACACCAGCACCATTACAACCACCAACACCAACACCAACACCAAAACCAACAACAGAATCTCCTCTACAAGAAATGGCAACAGCACCACTCAGGCTTGCGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCCGACTGCATTCTCGCACCGTATTTCCCTCACGATCGACAGCGCCAGTTCCTCAACGCTCACAAGTTGTTCGGAGTAAGCAACATCACCAAAATCATTAAGGTTGTCAGCCCTCGCGACAAGGACCAAGCCATGCGTACCATAATCTACCAATCCGACATGCGTGCCTCGGACCCTGTCGGAGGCTGCTACAGGTACATTATCGACCTGCAGACTCAGATTGAGTACTGCCGAGCCGAGCTGGACCTCGTCCTTCAGCAACTCGCCATGTTTCGAGCTCAGGCTCACCAGAATCAGCACCAGTATCAGCACCAGCACGGTATCTATGCTCCCAACAGCGTTAACGTCACCGTCAATGGAGATGGTGAGGTTTTGAACGCCGACCCGATGGGGCTGTACGGCCAGCCACAGTATCAGTGTCTGCAGCCGCACCAACAGGAGCAGTATGTTATGATGCATGAAAATGGGAGCCAGAACTTCAACGGCGCCACCCCTTTGCAGGAACAGATGAACACGTGGGCTGTGCAGAACACTGCTGTGTCGCTTTCTTCGTTGTCGTTGCAAGGACAGAGTAGTAATGTTAGCGATGAATACGATCACAAGGCCGTCATTGACATTGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAATCAGTGTTGTTTAAGATAGATGATGCAGTAATAAAAGCTGAGGGTGACTGCATGCAACATGCTCAAGATCATGATTTGAAAGCTGTGTTAAGCTACCAGGTGGTCTTCTGCTCAGCATCTCTTGCCTTGGACAAAGGGTTTGGGACTGCTTCAAGGCATGCGTTTCACTGCCTGTGCGTAGGTGTTGCATCACATGCTGTGGTTGCTGTGTTTGCTAGCAATCTTCTCATAACATATAATAATGATGTTCTTTTATGTTCTTTACTGTACTCTACTGCTGTCTTTCTTATGTTACGCCCCTGCATGAGGGCTTAG 1146 0.4887 MNNNNNNTSTITTTNTNTNTKTNNRISSTRNGNSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVVSPRDKDQAMRTIIYQSDMRASDPVGGCYRYIIDLQTQIEYCRAELDLVLQQLAMFRAQAHQNQHQYQHQHGIYAPNSVNVTVNGDGEVLNADPMGLYGQPQYQCLQPHQQEQYVMMHENGSQNFNGATPLQEQMNTWAVQNTAVSLSSLSLQGQSSNVSDEYDHKAVIDIDSDERSELGFESEELVHRSDESVLFKIDDAVIKAEGDCMQHAQDHDLKAVLSYQVVFCSASLALDKGFGTASRHAFHCLCVGVASHAVVAVFASNLLITYNNDVLLCSLLYSTAVFLMLRPCMRA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00264 381 Pfam Lateral organ boundaries (LOB) domain 38 133 IPR004883 -
Vian9g00264 381 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 36 192 - -
Vian9g00264 381 MobiDBLite consensus disorder prediction 1 33 - -
Vian9g00264 381 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00264 Vian-Chr9 2383298 2387846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00264 37 270 AS2 family AT3G13850 51.282 3.97e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vian9g00264 LOB 1.1e-35 No_clan