Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00217 ATGTCTGAGACGTTGGGTTTTAAGACCTATGCTCCTGCATATCTTAGCCCACAGGCGTCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCTGCTGCATCTGGTTATGATGAAAATGCTGCTATTTTGAATCATGCAATTCCATTGTCCCAACAGTTAAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTCAAAAGGCAGCCTCAATTATCAAAGATGCATTGTACGTGCTCAGTGCTGGCAGCAGCGACTTTGTGCAAAACTATTACGTCAATCCTTGGATCAACAAAGTATACACACCTGACCAGTATGGCTCCTTCTTAGTTGGTTCGTTCACCAGTTTTGTTAAGGACTTGTATAAATTGGGAGGCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACTCTGATGCCCAAGCATTTAACAAGAAGATCAACTCAGCTGTAGCAAATCTTCAAAAGCAACTTCCGGGTCTCAAGATTGCTGTTTTTGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTTGTGGAGGCAAACAGAGGTTGCTGTGGTACCGGGACTGTGGAGACAACATCTTTGTTGTGTAATCAAAAATCACCTGGAACTTGTTCTAATGCCACCCAGTATGTGTTTTGGGATAGTGTCCATCCTTCACAAGCAGCTAACCAAGTTCTAGCTGATTCATTAATTATCCAAGGCATAAGTCTTATCACATAA 822 0.4282 MSETLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDENAAILNHAIPLSQQLSYFKEYQGKLAKVAGSQKAASIIKDALYVLSAGSSDFVQNYYVNPWINKVYTPDQYGSFLVGSFTSFVKDLYKLGGRRLGVTSLPPLGCLPAARTLFGFHENGCVSRINSDAQAFNKKINSAVANLQKQLPGLKIAVFDIYKPLYDLVQSPSKFGFVEANRGCCGTGTVETTSLLCNQKSPGTCSNATQYVFWDSVHPSQAANQVLADSLIIQGISLIT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00217 273 CDD SGNH_plant_lipase_like 1 265 IPR035669 -
Vian9g00217 273 PANTHER GDSL ESTERASE/LIPASE EXL3 2 264 - -
Vian9g00217 273 Pfam GDSL-like Lipase/Acylhydrolase 8 263 IPR001087 GO:0016788
Vian9g00217 273 Gene3D SGNH hydrolase 1 268 IPR036514 -
Vian9g00217 273 SUPERFAMILY SGNH hydrolase 41 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00217 Vian-Chr9 1776955 1780374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00217 1 265 Pollen Coat Proteome AT1G75910 30.970 1.16e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00217 - - vun:114167332 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00217 9 1776955 1780374 Vian9g00217 9 1776955 1780374 ECH
Vian11g00207 11 1913501 1914951 Vian9g00217 9 1776955 1780374 PCT