Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00205 ATGAAGAAGGAGAAGGATCACAGCGACAATTCAGGCTCGCTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCAAGGGAAGGATGTGCCATCTTCGGTTCCTGCCACTGATAACACCTGGCTCAGATCCTACATTGCTGATACAGAGAATGAGCAGAATAAACATGCAATTGCCGTTGCCGCTGCCACTGCCGCCGCCGCCGATGCTGCCGTGGCTGCCGCTCAGGCTGCCGTGGCGGTTGTGAGGCTGACAAGTCAGGGTAGAGGTGCATTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCCGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGTATGTGCCTTCTTTCTTGTGATGGTTCAAATCAAATTGGTGTTGGTCATGTGGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAGGCTCTTGTTAGAGGGTACTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTCAGATCACAGCGAGCTCGTCGTTCCTTGAGCAAAGAAAGCAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGATGAAACAAGGAGTGAATCACACAGTAAAAGGCTACCTACATCCTACGAAACATCCTTGAATGGTTTTGATGAGAGCCCGAAGATTGTTGAAATTGACACATACAAGACTCGATCAAGGTCTAGGCGCTTTACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGTCAGGCAATGTCATCCCCTCTACCTTGTCATGTCCCTGGTCGAATCTCGGTTCCTGATTGCAGACACCTTCAAGATTTTGATTGGTACTTCAACGTTGATGAGTGTAGATTCCCCACTGCTCATAGCACACCACGTTTCACAAACTATGCTCGTCCCAATGCTCCAGCCACACCAGCCAAGAGTGTTTGTGGAGACACCTTCTTCAGACCTTGTTCAAATTTCCCCAACTACATGGCCAATACTCAGTCATTCAAGGCAAAACTAAGGTCTCACAGTGCTCCAAAACAAAGACCAGAACCCAAGAAAAGGCTCTCACTCAATGAAGTGATGGCAGCAAGAAACAGCATAAGTAGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGACTCCTGGAATTTTTGA 1203 0.4713 MKKEKDHSDNSGSLAPDKKEKKRWSFAKQGKDVPSSVPATDNTWLRSYIADTENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLVCAFFLVMVQIKLVLVMWARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRSQRARRSLSKESRFLPEVLARKSVERFDETRSESHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCQAMSSPLPCHVPGRISVPDCRHLQDFDWYFNVDECRFPTAHSTPRFTNYARPNAPATPAKSVCGDTFFRPCSNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLNEVMAARNSISSVRMQRPSSNFFQTQDSWNF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00205 400 MobiDBLite consensus disorder prediction 1 38 - -
Vian9g00205 400 ProSiteProfiles IQ motif profile. 101 128 IPR000048 GO:0005515
Vian9g00205 400 Pfam IQ calmodulin-binding motif 146 160 IPR000048 GO:0005515
Vian9g00205 400 Pfam IQ calmodulin-binding motif 103 117 IPR000048 GO:0005515
Vian9g00205 400 SMART iq_5 140 162 IPR000048 GO:0005515
Vian9g00205 400 SMART iq_5 100 122 IPR000048 GO:0005515
Vian9g00205 400 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Vian9g00205 400 MobiDBLite consensus disorder prediction 1 28 - -
Vian9g00205 400 PANTHER IQ-DOMAIN 5-RELATED 18 370 - -
Vian9g00205 400 Pfam Protein of unknown function (DUF4005) 307 381 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00205 Vian-Chr9 1681880 1683524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00205 30 384 IQD Protein Family AT3G16490 56.522 3.15e-104 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00205 - - gmx:100797686 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00205 9 1681880 1683524 Vian9g00205 9 1681880 1683524 ECH
Vian11g00202 11 1855667 1857122 Vian9g00205 9 1681880 1683524 PCT