Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00193 ATGCCGGTGTTGCGTAACGGAGCGAACAGGGGCCGGGGAGCAGCGAAACAACAGGAGCGGCTGCAGAGTCCAACAGTGGAAGGGGAGGCGATTGCGACGAGGACCCGGAGGCGGCGTGCAGCGGCAGCGGCGGCAGCAGTGCCGAAGACTAATAACAACGAAAATAATAAGCACAAGCAACAACAACAGCACCCGCCGGTGCAGGTGGTGGTGGTAAATGAGCAAGTAGTTGTTTCTGCGAAGGAGGAAGAGAATCGGGGATTGGGGGAAGGTGTTGGTGCGGCTGGAGCGGAGAGGGAAGAGGTAGGCGAGAAAGAGATGGTTGGACATGTCAGCGGAGGTCGGAGCAATGACAAGGCCAATGCCGGTGGTGAAGATGATGCCAATACTCCCGAGGTTCCTCAGAAGATCCAAGTAGGTAATTCCCCTTGTTATAAAGTAGAAAGAAAACTTGGCAAGGGTGGATTTGGTCAGGTATATGTTGGACGACGCTGTAGTGGAAATTTGAATGAGAGAACTGGACCTGGGGCTGTAGAGGCTATGCCATTCGTCATGTTCATCTTTCCCTATTATTTGTACAGCACTCTCGGTGGCAGTCATGGTGTCCCACAAGTACACTACAAGGGCAGACAGGGCGACTACTATGTCATGGTTATGGATATACTGGGACCTAGTCTGTGGGATGTTTGGAATAATAATAACTCCCATACCATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGATATGTGCACGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACGTCTGATGAGAAAAAATTGTTCCTTGTAGATCTTGGATTAGCTACTAAGTGGAGGGATAGTGCAACAGGCTCACATGTGGAATATGATCAAAGACCAGATGTGTTTAGAGGCACAGTCCGTTATGCTAGTGTTCATGCACATTTAGGGCGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACATTGATTTTTCTCCTCCGAGGTCGCCTTCCTTGGCAGGGATTCCAGGGAGAAAACAAAGGTTTTCTGGTTTGCAAGAAGAAGATGGGAACATCTCCAGAGATTATTTGCTGCTTTTGTCCCCAACCTTTTAAGCAGTTTGTTGAACATGTTGTGAACTTAAAGTTTGACGAAGAACCCAATTATGCAAAATATATTTCTCTATTTGATGGAATTGTTGGTCCTAACCCAGATATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGCCATAAGAGAGGCCGGTTAGCGATGGAAGAAGAGGACGATGACCAGCCAAAAAAGAAGACTCGTATTGGTTTGCCAGCATCACAGTGGATAAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGATATCACTATAATGTATCAGATGCAAGGTTATCCCAGCACATTGAGAAAGGAAATGAGGATGGCTTATATATTAGCAGTGTTGCTTCATGTCAGAGCGTATGGGCATTAATCATGGATGCGGGGACAGGTTTCGCTGGCCAAGTTTACGAACTGTCACCCTTCTTCCTCCATAAGGTTAGGCTTACTGAAGCACAAAGAAAGGGAAAGGTTGGGATTACTTTCCAGCATAGAGGAAAGAGAAGTTGTGGGGGTGGGGTGGGGGAGGGGAGGGGGCAAGAAGGGTGGGTAGAGGAGAATGGGGGAGGGAAAGAAGAACACACGTGGACACAAAAGGAATGGATCGTGGAGCAATGGGAACTAGGTTACTACATCAGCGCAATTGCTGGAGCTGCAAATGGGAGCTCGCTAGTAGTAATGTCCAAGGGTACACAGTTTGTGCAGCAATCATACAAAGTCAGTGATTCATTTCCTTTTAAGTGGATTAACAAAAAGTGGAGGGAGGGATTTTACGTGACTTCAATGGCCACCTCAGGGCCGAGATGGGGAGTCGTCATGTCTCGTGGTGCAGGATATTCAGACCAGGTGATTGAACTAGACTTTCTGTATCCTAGTGAGGGAATTCACAAGCGGTGGGACAGCGGTTACAGAATCACATCTACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTTAGTGTGCCAAGGAGGAAACCTTTAGATGAAACTCAGGAAACACTTAGGACTTCTGCTTTTCCTAGTACACATGTTAAGGAGAAGTGGGCTAAGAACCTCTACATTGCTTCTATATGCTATGGACGTACAGTTTCTTGA 2259 0.4692 MPVLRNGANRGRGAAKQQERLQSPTVEGEAIATRTRRRRAAAAAAAVPKTNNNENNKHKQQQQHPPVQVVVVNEQVVVSAKEEENRGLGEGVGAAGAEREEVGEKEMVGHVSGGRSNDKANAGGEDDANTPEVPQKIQVGNSPCYKVERKLGKGGFGQVYVGRRCSGNLNERTGPGAVEAMPFVMFIFPYYLYSTLGGSHGVPQVHYKGRQGDYYVMVMDILGPSLWDVWNNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTSDEKKLFLVDLGLATKWRDSATGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPEIICCFCPQPFKQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDDQPKKKTRIGLPASQWISVYNARRPMKQRYHYNVSDARLSQHIEKGNEDGLYISSVASCQSVWALIMDAGTGFAGQVYELSPFFLHKVRLTEAQRKGKVGITFQHRGKRSCGGGVGEGRGQEGWVEENGGGKEEHTWTQKEWIVEQWELGYYISAIAGAANGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTSMATSGPRWGVVMSRGAGYSDQVIELDFLYPSEGIHKRWDSGYRITSTAATWDQAAFVLSVPRRKPLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00193 752 MobiDBLite consensus disorder prediction 48 66 - -
Vian9g00193 752 SUPERFAMILY Protein kinase-like (PK-like) 144 415 IPR011009 -
Vian9g00193 752 SMART serkin_6 145 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00193 752 Pfam Protein kinase domain 211 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00193 752 PANTHER CASEIN KINASE-RELATED 144 720 - -
Vian9g00193 752 MobiDBLite consensus disorder prediction 1 66 - -
Vian9g00193 752 MobiDBLite consensus disorder prediction 559 578 - -
Vian9g00193 752 Gene3D Transferase(Phosphotransferase) domain 1 111 456 - -
Vian9g00193 752 CDD STKc_CK1 145 411 - -
Vian9g00193 752 MobiDBLite consensus disorder prediction 97 112 - -
Vian9g00193 752 ProSiteProfiles Protein kinase domain profile. 145 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian9g00193 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Vian9g00193 752 MobiDBLite consensus disorder prediction 81 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00193 Vian-Chr9 1557864 1568013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00193 216 411 MAP Kinase Kinase Kinase AT5G50180 24.121 6.91e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Vian9g00193 Pkinase 2.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00193 - - gmx:100799630 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00193 9 1557864 1568013 Vian9g00193 9 1557864 1568013 ECH