Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00186 ATGGCTTCCCTTTTGAGTGTGCTCTGTGTTGTGTTGGCTGTGATGAATAGCGCAGCCAAAATAGCTGCTAGGGAATTCAAAGTGGGTGGTGATTCCGGTTGGCATGAACCTGCCCCCAACGACACTGCATTTTATAATCAATGGGCTTCAACCAACAGGTTTCAAGTTGGTGATTCTTTGGTTTTTGAGTACCAGAATGACTCGGTTGTGAATGTGGAGAGATGGGAATACTTCCACTGTGACTCGAACAACCCCATCGGCGCATTTGATGATGGGAACAGCACAGTGATTCTTGGCAGCCCTGGGATGTTCTACTTCATCAGTGGAACTGAAGATCAATGCCAGAAAGGGGAGAAGTTGATGAAATATGACAGGATTAACTTATCGCGTTAA 393 0.458 MASLLSVLCVVLAVMNSAAKIAAREFKVGGDSGWHEPAPNDTAFYNQWASTNRFQVGDSLVFEYQNDSVVNVERWEYFHCDSNNPIGAFDDGNSTVILGSPGMFYFISGTEDQCQKGEKLMKYDRINLSR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00186 130 ProSiteProfiles Phytocyanin domain profile. 24 126 IPR003245 GO:0009055
Vian9g00186 130 Pfam Plastocyanin-like domain 41 117 IPR003245 GO:0009055
Vian9g00186 130 SUPERFAMILY Cupredoxins 23 121 IPR008972 -
Vian9g00186 130 Gene3D - 22 124 IPR008972 -
Vian9g00186 130 FunFam Early nodulin-like protein 1 23 123 - -
Vian9g00186 130 PANTHER BLUE COPPER PROTEIN 22 120 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00186 Vian-Chr9 1503465 1506715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00186 4 121 Phytocyanin Superfamily AT1G79800 49.153 5.35e-41 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00186 - - vra:106773065 236.113