Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00142 ATGATACAGAATGGTTGCATTATATCCCAAGGGTATGCCCCTGTGAATTCTAGATCACGCAATCATGTCGTACCCAGCAGCTCTGTGGTTCGATGTGCTTCTGGAATGTCTGCTAAGGTTGCCGTCTCAAACATCCGGAGGTTTTCGCGACATAATTTAGAATGTAAATCCCCGTTTCCAGGAGGAATGGCATTTTCAAACGTGTTTGCTGCATCAAGCTTGCGTTTAAGTGAGGGTCAAAATCTTCTCTTTCGCTCTTTCCCTGGGTTACCCAAATTAGCGAAGTCCAATATGGTCACTAGAGCATCAAAGGATGTCCCAACTAGCTTCCGTTACCCTCCAATGACCAAAAAACCGCAATGGTGGTGGAGATCATTAGCATGCCTACCTTACCTTATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATATAATCTTCATCCATTTTTGGAATGCTTTGAATTCTACACGTACCCTTTTCTTATGGCAATTGGGAGCCTACCTAGCTGGTTTCTCATGGCATACTTCTTTGTTGCATATCTTGGAATTGTGAGGAGAAAAGAATGGCCACATTTCTTCAGATTTCATGTTGTGATGGGAATGTTATTGGAGATTGCCCTGCAGGTTATAGGAACTGTGAGCCGCTGGATGCCACTATCACTCTACTGGGGCAAAATGGGAATGCATTTCTGGACTGCCGTATCATTTGGTTATCTCTTTACTGTTTTGGAGTGCATAAGGTGTGCTCTTGTTGGTATGTATGCTGACATTCCTTTCATCTGTGATGCAGCATATATCCAAATTCCATATGATTAA 822 0.4331 MIQNGCIISQGYAPVNSRSRNHVVPSSSVVRCASGMSAKVAVSNIRRFSRHNLECKSPFPGGMAFSNVFAASSLRLSEGQNLLFRSFPGLPKLAKSNMVTRASKDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKMGMHFWTAVSFGYLFTVLECIRCALVGMYADIPFICDAAYIQIPYD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00142 273 Pfam Chloroplast import apparatus Tic20-like 96 266 IPR005691 -
Vian9g00142 273 NCBIfam Tic20 family chloroplast protein importer 1 273 IPR005691 -
Vian9g00142 273 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 29 273 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00142 Vian-Chr9 1152525 1154128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00142 88 273 Chloroplast and Mitochondria Gene Families AT4G03320 41.799 1.04e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00142 - - gmx:100818669 508.449