Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00134 ATGGTTGGAGGTTCCTTGGGAGGGTTGCAAGAGCACCTCAAGTTAGCCAGAGACTACGCTGTGGAAGGGCTCTACGACACTTCCATCATCTTCTTCGACGGTGCCCTTGCTCAGATCAACAAACACCTGAGCACCGTCGAGGACCCTTTGATTCGCGCAAAATGGATGAATGTGAAGAAAGCGCTTTCGGAAGAAACCGAAGTTGTGAAACAGTTGGATGCCGAGAGAAGGGCTTTCAAAGAAAACCCAATTGGAAGACGCGCCGTTTCGCCTCCCATTTCTGCCAAGTCCTCGTCTTTTGTTTTTCAGCCGTTGGATGAGTACCCCACTTCATCGAGCGGTCCTGCTCCTTTTGATGATCCTGATGTATGGCGGCCACCCAGTAGGGATACCAGTAGGAGACCCGCCAGGGCCGGTCAAGTGGGTACCCGCAAATCTCCCCAAGATGGGGCCTGGGCGCGAGGTTCTACTGCTAGAAGTGGTGCAACTGGGCGTGGTGGTGCTAAAGGTGGTGCTACTAGTAGGGTTAACTCGGGGACACGAGCGCCCGCTGCTGGAAAGAAGGGCAATGTTTCTGGAAAGTCGACCAATACCAAGACGGATACTGCAGCTGTTACTAATGGACAAAATGGTGATTCTGAAGATGGTAAGTCAAAGAAGGGTCAATATGAAGGTCCCGATCCTGAATTGGCTGCAATGCTTGAAAGGGATGTGTTAGAAACCTCTCCTGGAGTTAGATGGGATGACGTTGCAGGACTTACTGAAGCAAAAAGACTTCTAGAAGAAGCTGTTGTGCTTCCCTTGTGGATGCCTGAATATTTCCAGGGAATCAGGAGGCCATGGAAAGGCGTTCTCATGTTTGGACCTCCAGGAACCGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACCACTTTCTTTAACGTATCTTCTGCAACTTTGGCTTCTAAATGGCGTGGTGAGAGTGAGCGCATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGCACAATATTTATCGATGAAATTGATTCTCTATGCAATGCAAGGGGGGCATCCGGGGAGCATGAATCGTCTAGAAGGGTGAAATCTGAACTTCTTGTTCAGGTTGATGGTGTAAGCAATAGTGCCACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCCGCAACTAACTTCCCATGGGATATAGATGAGGCATTAAGGAGAAGGCTGGAAAAACGTATATATATTCCTCTTCCAAATTTCGAGAGTCGTAAAGAGCTGATCCGGATAAATTTGAAGACTGTTGAGGCAAGTTGTGATGTTAATTTCTGTGTGGCGACTGATGTGAATATAGATGAAGTGGCCCGGAGGACAGAGGGCTACAGTGGAGATGATTTGACCAATGTGTGTCGTGATGCTTCCTTGAATGGTATGAGGCGAAAGATAGCAGGAAAGACTCGTGATGAAATCAAGAACATGTCCAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCTTTGGTAAAGGTCCAACGAAGTGTTTCTCAGGCCGACATTGAACGCCACGAGAAGTGGTTTACCGAGTTTGGATCAGCATGA 1623 0.4781 MVGGSLGGLQEHLKLARDYAVEGLYDTSIIFFDGALAQINKHLSTVEDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKENPIGRRAVSPPISAKSSSFVFQPLDEYPTSSSGPAPFDDPDVWRPPSRDTSRRPARAGQVGTRKSPQDGAWARGSTARSGATGRGGAKGGATSRVNSGTRAPAAGKKGNVSGKSTNTKTDTAAVTNGQNGDSEDGKSKKGQYEGPDPELAAMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEASCDVNFCVATDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFTEFGSA 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00134 540 FunFam Katanin p60 ATPase-containing subunit A1 242 410 - -
Vian9g00134 540 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 540 IPR028596 GO:0008017|GO:0008568|GO:0051013
Vian9g00134 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 536 IPR027417 -
Vian9g00134 540 Gene3D - 4 80 - -
Vian9g00134 540 Gene3D - 422 516 - -
Vian9g00134 540 MobiDBLite consensus disorder prediction 190 212 - -
Vian9g00134 540 SMART AAA_5 280 423 IPR003593 GO:0016887
Vian9g00134 540 FunFam Katanin p60 ATPase-containing subunit A1 422 516 - -
Vian9g00134 540 Pfam ATPase family associated with various cellular activities (AAA) 284 421 IPR003959 GO:0005524|GO:0016887
Vian9g00134 540 CDD Kp60-NTD 9 75 - -
Vian9g00134 540 MobiDBLite consensus disorder prediction 105 226 - -
Vian9g00134 540 Pfam Vps4 C terminal oligomerisation domain 493 538 IPR015415 -
Vian9g00134 540 Pfam AAA+ lid domain 451 492 IPR041569 -
Vian9g00134 540 PANTHER AAA DOMAIN-CONTAINING 25 539 - -
Vian9g00134 540 FunFam Katanin p60 ATPase-containing subunit A1 4 80 - -
Vian9g00134 540 ProSitePatterns AAA-protein family signature. 393 412 IPR003960 GO:0005524|GO:0016887
Vian9g00134 540 Coils Coil 62 82 - -
Vian9g00134 540 Gene3D - 242 531 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00134 Vian-Chr9 1025984 1029460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00134 205 532 Calmodulin-binding Proteins AT3G56690 36.705 1.78e-49 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00134 K07767 - gmx:100787634 931.398