Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00089 ATGGTTTTGCTGCGGAAAAGTTTCGAACCGATTGCGGTGAAAAGATTGAAAGTTTGGAGCAACAGAGCCGAGACAGAATTCACAGTTGAGCTTGAAATCTTAGCAAGAATTCGACACAAGAATCTTCTCAGTCTTCGTGGCTACTGTGCAGAAGGACAGGAACGGTTAATTGTGTATGAATATATGCAAAATCTGAGTCTCCACTCTCATCTTCACGGACATCATTCATTCGAATGCTCTCTGGATTGGAATCGTCGGATGAATATCGCAATTGGTTCTGCTGAAGGAATTGTTTCCACGGTGAGGCGATCGATAGTTGATTGGGCATTGCCATTGGTTTGTGAGAAGAAATTTGGTGAAATTGCTGATCCAAGACTAAATGGTAACTATGTGGAGGAAGAGCTTAAAAGAGTTGTTTTAGTTGCTCTTATGTCTGCTCAGGATCTGCCTGAGAAGAGACCAACCATGCTTGATGTGGTAGAGCTACTCAAGGGAGAGTGTAGGGATAGATTTTCTCATATAGAGAACAGTGACATGTTCAGAAACCCTTTAGCTGCAGAAAGCAATGATGGAACATCATTGGCTGATGACAGATTAGACTGTATCTCAGAAGAAAAAGAATTAGAACGTCCATTGAGAGAAAATGCTGAACTATGA 657 0.4155 MVLLRKSFEPIAVKRLKVWSNRAETEFTVELEILARIRHKNLLSLRGYCAEGQERLIVYEYMQNLSLHSHLHGHHSFECSLDWNRRMNIAIGSAEGIVSTVRRSIVDWALPLVCEKKFGEIADPRLNGNYVEEELKRVVLVALMSAQDLPEKRPTMLDVVELLKGECRDRFSHIENSDMFRNPLAAESNDGTSLADDRLDCISEEKELERPLRENAEL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00089 218 Gene3D Transferase(Phosphotransferase) domain 1 4 98 - -
Vian9g00089 218 Pfam Protein tyrosine and serine/threonine kinase 9 97 IPR001245 GO:0004672|GO:0006468
Vian9g00089 218 PANTHER OS01G0253100 PROTEIN 103 167 - -
Vian9g00089 218 SUPERFAMILY Protein kinase-like (PK-like) 9 98 IPR011009 -
Vian9g00089 218 Gene3D Transferase(Phosphotransferase) domain 1 99 181 - -
Vian9g00089 218 SMART tyrkin_6 1 163 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00089 Vian-Chr9 726832 728555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00089 11 97 Trihelix Transcription Factor Family AT1G70460 49.425 2.38e-22 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Vian9g00089 PK_Tyr_Ser-Thr 1.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00089 - - vun:114167562 192.971