Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00063 ATGGCAGCAAAGATGGTGTGCGTGACTGGTGCTGGAGGATTCGTGGCGTCATGGCTTGTTCAGCTTCTTCTCTCCAAAGGTTACAATGTCCATGGAACAGTGAGACAACCCGGTAGTGAGAAATATGAGCACTTGAAGAAACTGGAGGGAGCTTCTGAAAACCTCACACTCTTCAAGGCAGATCTCTTGAATTACGAATCTATCCTCTCAGCAATTGCTGGATGCACTGCTGTTTTTCATGTCGCAAGTCCTGTACCCTCAACAATTGTTCCCAACCCTCAGGCAAGCCTAATCATCTCATTCGTAGAAGTGATTGAACCTGCTGTGCAAGGAACCACTAACGTACTTCAAGCTTGTCTTGAAACTAAAGTACAACGAGTTGTCTATGTGTCATCGATATCTGCTATTAGCATTGGCCCAAATATGCCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAAAAAAACTCAGAACTGGTACTGTTATTCAAAGACAGAGGCAGAGGAGCAGGCCCTGGACTTTGGAAAAAGAACTGGCCTTGATGTGGTAAGCATTTGCCCTTCCATTGTGTGGGGGCCAATTTTGCAGTCAACCACTGTCAATGCAAGTAGCTTGGTTCTCCCCAAACTTTTGAAAGGTGGTGACTCATTTGAAAATAAGACCCGTTGGATAGTCGATGTACGGGATTTAGTTGATGCAATACTTTTGGTGTACGAGAAGCCTGAGGCAGAACGGAGATACATATGCACTGCACACACCATCAAGACACGGGATTTGGTAGAGAAACTGAAGAGTATATATCCAAGCTACAAGTACCCTTCCAACTTCACTGAGCTGGATGATTACTTAAGGTTCAGCTCAGAGAAACTAGAAAGGTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTTGAGAGCTATCGAGAGGCTGGACTCCTGCAATTCGAATAA 981 0.4434 MAAKMVCVTGAGGFVASWLVQLLLSKGYNVHGTVRQPGSEKYEHLKKLEGASENLTLFKADLLNYESILSAIAGCTAVFHVASPVPSTIVPNPQASLIISFVEVIEPAVQGTTNVLQACLETKVQRVVYVSSISAISIGPNMPKDKVIDESYWSDKDYCKKTQNWYCYSKTEAEEQALDFGKRTGLDVVSICPSIVWGPILQSTTVNASSLVLPKLLKGGDSFENKTRWIVDVRDLVDAILLVYEKPEAERRYICTAHTIKTRDLVEKLKSIYPSYKYPSNFTELDDYLRFSSEKLERLGWKYRSLEETLIDSVESYREAGLLQFE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00063 326 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 324 - -
Vian9g00063 326 Gene3D - 1 326 - -
Vian9g00063 326 CDD FR_SDR_e 6 301 - -
Vian9g00063 326 Pfam NAD dependent epimerase/dehydratase family 6 250 IPR001509 -
Vian9g00063 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 314 - -
Vian9g00063 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 319 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00063 Vian-Chr9 492265 495603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00063 6 323 Monolignol Biosynthesis Gene Families AT2G33590 60.502 2.21e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00063 - - gmx:100784817 514.998