Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00044 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAACCCACGCAGAGTTCATCAAGAACTTCCCGAGGTAGAAAGCAAGCTTTTTTCTTTGGGAATGCCCAAGTTTAACGTCGAAGAATGTTGGGAATCTAAAAGACCCATCAAAGATGAGTCTACTAGTGACTTGGAGGAGGAACTGAAGCGGGTGACAGCAGAAAACAAGAAGTTGGCTGAAATGCTGTCGGTGGTGTGTGAGAACTACAACACTTTGCGAAGCCATTTGATGGAATATACGAGGAAAAATGGTGAAAAAGAGACCAGCCCGACATCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTATTTGTGTGATGGGAACTAACAATGGAAACTCCGAGAGCAGCTCCACTGATGAAGAATCTTGCAAGAAACCGAGGGAAGAAACCATGAAACCAAAAATTTCAAGAGTTTATGTCAGGACCGAAGCATCTGACACCACCCTTATTGTGAAAGATGGGTACCAGTGGAGGAAGTATGGGCAAAAAGTGACCAGAGATAACCCATGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTAAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCTACTTATGAAGGGGAGCACAACCATCCCCAAGCTTCTTCACAAATGGAGGCAACATCAGGTTCTGGGCGTAGTGTGACCCTTGCTTCAGTGCCTTGTGCAGCTGCCACTCCAACACTTGTTACCCTTGACTTGACAAAATCTAAGGGCAGCAACGATTCCAAGAGCACGAAAACTAAAGTAGATACACCTAAAGTGCAGCAGGTTTTGGTGGAACAGATGGCAACTTCTTTGACCACGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATAATTGA 954 0.4403 MDCSSWINTSLDLNINPRRVHQELPEVESKLFSLGMPKFNVEECWESKRPIKDESTSDLEEELKRVTAENKKLAEMLSVVCENYNTLRSHLMEYTRKNGEKETSPTSKKRKSESSNNNSICVMGTNNGNSESSSTDEESCKKPREETMKPKISRVYVRTEASDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQASSQMEATSGSGRSVTLASVPCAAATPTLVTLDLTKSKGSNDSKSTKTKVDTPKVQQVLVEQMATSLTTDPNFRAALVAAISGRLLHNN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00044 317 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 313 IPR044810 GO:0003700
Vian9g00044 317 MobiDBLite consensus disorder prediction 110 134 - -
Vian9g00044 317 FunFam WRKY transcription factor 40 153 230 - -
Vian9g00044 317 SMART WRKY_cls 168 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00044 317 Gene3D WRKY domain 152 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian9g00044 317 Pfam WRKY DNA -binding domain 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00044 317 SUPERFAMILY WRKY DNA-binding domain 164 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian9g00044 317 MobiDBLite consensus disorder prediction 94 147 - -
Vian9g00044 317 MobiDBLite consensus disorder prediction 94 109 - -
Vian9g00044 317 ProSiteProfiles WRKY domain profile. 163 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian9g00044 317 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00044 Vian-Chr9 361975 363447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00044 4 317 WRKY Transcription Factor Family AT1G80840 53.049 4.26e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian9g00044 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00044 - - gmx:100170678 521.931