Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00031 ATGATCATCAACGTGAAGGAATCGACGATGGTGCGGCCGGCAGAAGAGGGGGAGCGGCGGGTGGTGTGGAACTCGAACGTGGACCTGGTGGTGCCGAATTTCCACACGCCCAGCGTCTACTTCTACAGAGCGAACGGCGCGTCCAACTTTTTCGAGGGGAAGGTTCTGAAGGAGGCACTGAGCAAGGTGCTGGTGCCCTTCTACCCAATGGCTGGGAGGCTCCGGCGAGACGAAGACGGTCGCGTGGAGATTGACTGCGACGGTCAGGGGGTTCTCTTCGTGGAGGCCGACACCGGCGCCGTCATCGACGACTTCGGGGACTTTGCACCGACCCTTGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCGCAAGGGATCGAAACCTATCCCCTCTTGGTGTTACAGGTAACACACTTCAAATGTGGAGGGGCATCACTTGGAGTTGGTATGCAGCATCATGTAGCAGATGGAGCCTCTGGTCTTCATTTCATCAATACATGGTCTGATGTGGCTCGTGGCTTGGATGTATCCATTCCACCATTCATTGATAGAACAATACTTCGTGCGAGAGATCCACCTCGACCAGTTTTTGATCACATTGAATACAAGCCCCCACCAGCCATGAAAACTCAACCAGCCACAGAATCTGATACTGCAGCTGTCTCTATTTTCAAACTGAACAGAGACCAGCTCTCCACCCTTAAAGCCAAGTCCAAAGAAGATGGCAACACAATCAACTACAGCTCTTATGAGATGTTGGCTGGACACGTTTGGAGAAGTGTCTGCAAAGCAAGAGCACTTCCTGAAGATCAAGAGACCAAATTGTACATTGCAACTGACGGAAGATCAAGGCTTCAACCTTCTCCTCCACCTGGTTACTTTGGCAATGTCATATTCACAACCACACCCATGGCTGTGGCAGGTGATCTCATCTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACAACGCATTGCTACGAATGGACAACGAATATTTGAGATCCGCTCTTGACTATCTAGAGCTGCAACCTGATCTCAAAGCTCTGGTTCGTGGTGCACACACTTTCAAATGTCCAAATCTTGGCATCACAAGCTGGACCAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCCATATTCATGGGTCCTGGTGGAATTGCATTCGAGGGTTTATCTTTCATAATCCCAAACTCCACCAATGATGGTAGCTTATCTGTCGCAATATCTCTTCAGCCCGACCATATGAAGCTGTTTAAGGAATACTTGTATGACATTTGA 1293 0.5019 MIINVKESTMVRPAEEGERRVVWNSNVDLVVPNFHTPSVYFYRANGASNFFEGKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPAVDYSQGIETYPLLVLQVTHFKCGGASLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPVFDHIEYKPPPAMKTQPATESDTAAVSIFKLNRDQLSTLKAKSKEDGNTINYSSYEMLAGHVWRSVCKARALPEDQETKLYIATDGRSRLQPSPPPGYFGNVIFTTTPMAVAGDLISKPTWYAASRIHNALLRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAFEGLSFIIPNSTNDGSLSVAISLQPDHMKLFKEYLYDI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00031 430 FunFam Tryptamine hydroxycinnamoyl transferase 207 428 - -
Vian9g00031 430 Gene3D - 210 430 IPR023213 -
Vian9g00031 430 Gene3D - 1 205 IPR023213 -
Vian9g00031 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 428 - -
Vian9g00031 430 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Vian9g00031 430 Pfam Transferase family 3 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00031 Vian-Chr9 301865 303456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00031 1 430 Monolignol Biosynthesis Gene Families AT5G48930 76.443 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00031 K13065 - gmx:100820075 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00031 11 295259 296629 Vian9g00031 9 301865 303456 PCT