Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00013 ATGAAACTCTCAAGAAGCTTTTCGATATGCACCCCAAAAATCATTAAGAAAATCCCAAACCATCTGAAATCATCGATACCCAGATCCACAAGCTGGCATATTCAACCTCTTTCCAAGAAGCCATTGCTGGGTTCAGGAGTCTCCTCCGACGGCGGCGCAAGGAATGCCAAGGTTCCCAAAGGCTCCCTCGCCGTCTATGTGGGCCCCCACTTCCGACGCTTCGTCATTCCGGTACGCTTCTTGGCCATGCCTGACTTCGCTGCGTTGATGGAATCCGTCGCCGAAGAATATGGCTGCGATCATCACGGCGCCATTCACATCCCCTGCGATGAAGACCATTTTCAGCAAATTTTGACCTCATGTTCCCAACGAAAACGGGCCTTCCTTCCTCCCAAGAAACTTTCCGACATCCCAATCATAAGCAGCCATTGA 432 0.5069 MKLSRSFSICTPKIIKKIPNHLKSSIPRSTSWHIQPLSKKPLLGSGVSSDGGARNAKVPKGSLAVYVGPHFRRFVIPVRFLAMPDFAALMESVAEEYGCDHHGAIHIPCDEDHFQQILTSCSQRKRAFLPPKKLSDIPIISSH 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00013 143 Pfam Auxin responsive protein 50 119 IPR003676 GO:0009733
Vian9g00013 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00013 Vian-Chr9 192513 192944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00013 58 118 Calmodulin-binding Proteins AT3G43120 55.738 1.98e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00013 K14488 - vun:114165672 243.817