Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00004 ATGATGTTAGAAGTGGAGGTAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCAAGGACCATGTTCGTCATTACCAACTCTCTTTTCTCGATCAAGTTTCTCCCATGGTGTATAACCCTATAGTTCTCTTTTACTCTTGCGACGGTATCACTCAATTCAACAGAACCACCATTTCCGAAAAGCTCAAGAAATCTTTGTCTGATGTTTTAACCCATTTCTACCCGCTTGCCGGGCGAGTCAACGGCAACAGTACTTTTGTAAACTGCTACGACGAGGGTGTTCCCTACTTAGAAGCAAGAGTGAAGTGCAAAGTTGTAGACGTTATTCGCAAACCAGTTCCGGGAGAACTCAACCGTTTGGTTCCATTTCTACTACATGATGTCACCGACATCACATTTGGTGTTCAACTTAATGTTTTTGATTGCGGTGGCATCGCAATCGGAGCTTGCCTTTCACACCAGATCGCAGACGGACTGTCATTTTTCACGTTCCTCAATTGTTGGGCAGCCATTGCTAGGGAGGAAAGTGTGTTGCCAAATCCACAGTTTATTTCAGCTAAGCTCTTCCCACCGAAAAATATATCTGGGTTTGACCCTCGAAGTGGCATCGTGAAGGAGAACATCATCTGCAAGATGTTTGTGTTTGACGGTTCTGTTGTTGAAAATCTTAGAGCAAGATATGCAGCAGGTGCCACTCGAGTGGAGGCCTTATCTGTTTTCATCTGGAGTCGCTATGTGGCTGTCACTAGAAAGCAATCTCTTCCACAGAGAACATATGCTGTGATTCACGCAGTGAACCTGCGTCCAAAGATGGAACCACCACTTCCTCCCGACTCCTTTGGCAACTACTACCGAATCACTATGACAACTTCGTCTTTGAACACCGAAGAGGAGTGTAATGATCTTGATCTAGCGAAACAGGTAAGGGATCAGATAAAGAAGATTGACAAAGATTATGTGAGAAAACTCCAAGATGGAAACGAGCATTCTAATTTCCTGAAGGATATTTCATTTAGAGTGCTTGAGAAGGGGGAACTAGTCTCGTTTAATATTACTAGTTTGTGTAGGTTTCCTTTGTACGACTCTGATTTTGGATGGGGAAAACCAACATGGGTAGGTTCACCCGCTTTAACTTTCAAAAATCTGGTTGTGCTTATAGACGCAAAGAATGGCGGTGGCATAGAGGCTTATGTTAGCTTAAAGGTGGAGGACATGGCAAAGTTCGAGGCAGATGAGGAGTTGCTTGCCTTGGTGAATACACCACGGGCTTCTTCATTCATGCGTGCAATGTGA 1296 0.4398 MMLEVEVISKEIIKPSSPTKDHVRHYQLSFLDQVSPMVYNPIVLFYSCDGITQFNRTTISEKLKKSLSDVLTHFYPLAGRVNGNSTFVNCYDEGVPYLEARVKCKVVDVIRKPVPGELNRLVPFLLHDVTDITFGVQLNVFDCGGIAIGACLSHQIADGLSFFTFLNCWAAIAREESVLPNPQFISAKLFPPKNISGFDPRSGIVKENIICKMFVFDGSVVENLRARYAAGATRVEALSVFIWSRYVAVTRKQSLPQRTYAVIHAVNLRPKMEPPLPPDSFGNYYRITMTTSSLNTEEECNDLDLAKQVRDQIKKIDKDYVRKLQDGNEHSNFLKDISFRVLEKGELVSFNITSLCRFPLYDSDFGWGKPTWVGSPALTFKNLVVLIDAKNGGGIEAYVSLKVEDMAKFEADEELLALVNTPRASSFMRAM 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00004 431 Gene3D - 206 418 IPR023213 -
Vian9g00004 431 PANTHER F21J9.9 6 419 - -
Vian9g00004 431 Gene3D - 1 197 IPR023213 -
Vian9g00004 431 Pfam Transferase family 4 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00004 Vian-Chr9 102535 103830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00004 3 410 Monolignol Biosynthesis Gene Families AT5G48930 26.818 6.94e-35 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00004 K13065 - gmx:102670206 699.123