Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01672 ATGCCAAGGACCCCTTCTAGCCCTAATGACTTGGACCTCTTCTACACCTCAGTTTCTGCTTCCACAACTTCTAGCATGGTAGCCCTAGAAATGGAGCTTTTCTCCAATTTTCAATTTATTCTCCTCACCCTCCTCATGTTTCTTGGTGGGGAAGTTTTCACTTCCATGCTCGATCTTCTACTTGCTAGGAATAAACTCATCCAAAACAAATTACGTAGCATCAATCCTTCTTCACCCTCAGATGAGTCCCCGACCAATGCCACTCATATTGAGCTTGCCTTAGTTTCTATTCCTCACTCAAAATCACAAAACCAGACACTGTCTGATAATGTTGCATCCGTTAGACTTAAGTATACCTGTCTTCGTTATCTGACTTACGTGGTGTTAGGTTACTTTGTTGTGGTTCAGTTTGTTGGATTTAGTTTGGTGTCTTTGTATATGACAGTGGTAGCGAGTGCAAGACAAGTACTGCGAAAGAAACACATTAAAGTTGTAACATTTTCTTTGTTTACCGTCGTTTCCACTTTTGCCAGTTGTGGCTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGTCTTCTCCTCCTTCTTCTCCCACATGTGTTTCTGGGCAACGCCCTGTATCCACCGTGTCTGACACTTGTGCTAATGGTTTTGGAAAAAGTTACCAGAAAAGAGGAATTCTCACAGTTGCTGAAGAATTCCAACAACCTCGGCTATAGACATTTGCTCTCTGTTTATCGTTGTTGTCTCCTGGTTGGTACAGTGTTTGGTTTGAACGTTATACAGTTTGTGATGTTTTGGTCCGTTGAATGGAACTCCGAAATCATGGAGGGTCTGAATTTGTATGAGAAAGTGGTAGCGTCATTGTTTCAAGTTTCAAACGCCAGACACGCCGGTGAATCTGTTTTTGATCTCTCTTCCATCTCTTCAGCCATATTAGTACTCTTCATTGTGATGATTGCTTATGGGAACGTAGGGTTCTCCATGGGATACAGCTGCGCAAGGCAGTTGAAAGGAGATGGTAGCTGCAAAGATTCATGGGTTGGATTTTCTGGAAGATGGAGCAACAAAGGAAAGTTCATCCTTATATTGGTCATGTTCTTTGGGAGGCTCAAGAAGTTCAACATGAAAGGTGGCAAAGCGTGGCACCTCTCTTAG 1173 0.4288 MPRTPSSPNDLDLFYTSVSASTTSSMVALEMELFSNFQFILLTLLMFLGGEVFTSMLDLLLARNKLIQNKLRSINPSSPSDESPTNATHIELALVSIPHSKSQNQTLSDNVASVRLKYTCLRYLTYVVLGYFVVVQFVGFSLVSLYMTVVASARQVLRKKHIKVVTFSLFTVVSTFASCGFVPTNENMMVFKKNSGLLLLLLPHVFLGNALYPPCLTLVLMVLEKVTRKEEFSQLLKNSNNLGYRHLLSVYRCCLLVGTVFGLNVIQFVMFWSVEWNSEIMEGLNLYEKVVASLFQVSNARHAGESVFDLSSISSAILVLFIVMIAYGNVGFSMGYSCARQLKGDGSCKDSWVGFSGRWSNKGKFILILVMFFGRLKKFNMKGGKAWHLS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01672 390 Pfam Cation transport protein 117 325 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vian8g01672 390 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 326 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01672 Vian-Chr8 36040867 36042905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01672 323 389 Inorganic Solute Cotransporters AT4G10310 60.294 3.19e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01672 K24976 - gmx:100786243 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01672 8 36040867 36042905 Vian8g01672 8 36040867 36042905 ECH