Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01671 ATGGCGAACTTTGCCAACTTCACTCAGAAACATCATCGTCTTCGGAGGTTTTTCCCACACAAACTCAGATTCCTGCTCCGTTTTCTAGCCTTCCATGTCCACCCCTTCTTTATTCAACTCTGTTATTTTGGGATACTTTCTCTGTTTGGTTACCTTGCTCTCAAAAACTCAAACCCAAGATCCCCCGGTAGACCAAAGGACTTTGACCTCTTTTACACCTCTGTTTCTGCTTCCACTGTTTCTAGCATGGTGGCAGTTGAAATGGAGGCTTTCTCCAATTCTCAGCTCATTCTCCTCACCTTTCTCATGTTTGTCGGCGGGGAAGTTTTCACTTCCATGCTTGACCTTCTATTTGCCAGGTATAAACTCACCCAGTCTGTCAGAAACAGAGATAGCACCAACCCCTTTTCACCCACAGCAGAGAAGCCCCCAGTTCATGACAACCATGTCGAGCTTGGTTTAATATCTATTCCTCACTCTCAACCCGAAAACCACAACCCTAGTAACGACAGTTATAGACTTAAGTATAACTGTCTTACTTATCTGACTTATATAGTTTTAGGTTACTTTGTGGTTGTTCAATTGGTCGGCTTCAGTTCGGTGTCTTTGTACATGACCTTGGTACCTAGTGCAACAAAAGTACTGAAAAACAAAGACATTAAGATTTCAACATTTTCTCTGTTCATCATAGTTTCCACTTTTGCTAGCTGTGGTTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGGCTTCTCCTCCTTATACTCCCACACGTGTTTCTAGGTAACACCCTTTACCCTCCTTGTTTGAGGGCGGTGATTATGGGTCTAAGAAAGGTGAGCAGAAGAGAGGAATTCTCACACCTGCTGAAGAATTTCAAAGACATTGGGTACGATCATATGCTCTCTGGTCTTCAATGTTGCTTCTTGGTTGCTACTGTTTTGTGTTTGAATGTTATACAGTTTGTGATGTTTTGGTCCGTGGAGTGGAAAACGAAAACTATGGAGGGTTTGAATTTTTATGAGAAAGTGGTGGGATCGTTGTTCCAAGTTACAAATGCGAGACACGCTGGGGAATCTGTGTTCGATCTCTCTTCCATGTCTTCAGCCATATTGGTGGTCTTCGTTGTCATGATGTACCTTCCGCCATATACTACATTTTTACCTGTAAGGGAGGAGGAAGATGACGCCAAGAGAAAAAGAAAAAGCGCAGTGGAGTGTGTTGTATTTTCTCAGCTCTCTTACTTAGCCATTTTCATCATTCTGGTATGCATGACAGAGAGCAAAAGCTTGAAAGAGGATCCACTCAACTTTAACGTGCTCAGCATCACCCTCGAAGTCATAAGTGCTTATGGGAATGTAGGGTTCTCCATGGGATACAGCTGCGCAAGGCAGTTGAAAGGAGATGGTAGCTGCAAAGATTCATGGGTTGGATTTTCTGGAAGATGGAGCAACAAAGGAAAGTTCGTCCTTATGTTGGTCATGTTCTTTGGGAGGCTCAAGAAGTTCAACATGAAAGGTGGCAAATCGTGGATCCTCTCTTAG 1557 0.4329 MANFANFTQKHHRLRRFFPHKLRFLLRFLAFHVHPFFIQLCYFGILSLFGYLALKNSNPRSPGRPKDFDLFYTSVSASTVSSMVAVEMEAFSNSQLILLTFLMFVGGEVFTSMLDLLFARYKLTQSVRNRDSTNPFSPTAEKPPVHDNHVELGLISIPHSQPENHNPSNDSYRLKYNCLTYLTYIVLGYFVVVQLVGFSSVSLYMTLVPSATKVLKNKDIKISTFSLFIIVSTFASCGFVPTNENMMVFKKNSGLLLLILPHVFLGNTLYPPCLRAVIMGLRKVSRREEFSHLLKNFKDIGYDHMLSGLQCCFLVATVLCLNVIQFVMFWSVEWKTKTMEGLNFYEKVVGSLFQVTNARHAGESVFDLSSMSSAILVVFVVMMYLPPYTTFLPVREEEDDAKRKRKSAVECVVFSQLSYLAIFIILVCMTESKSLKEDPLNFNVLSITLEVISAYGNVGFSMGYSCARQLKGDGSCKDSWVGFSGRWSNKGKFVLMLVMFFGRLKKFNMKGGKSWILS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01671 518 Pfam Cation transport protein 409 469 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vian8g01671 518 Pfam Cation transport protein 175 385 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vian8g01671 518 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 28 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01671 Vian-Chr8 36025938 36029337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01671 55 517 Inorganic Solute Cotransporters AT4G10310 47.917 6.76e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01671 K24976 - gmx:100797835 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01671 8 36025938 36029337 Vian8g01671 8 36025938 36029337 ECH