Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01658 ATGAAGCAAAAGGATTGTTACAGAAAAGTGACAGGGAAAGTGGTGGTGGTTGCAGTTGAAGCAACGAAAGAAGTTTCAAGGAGTGGTTTGATGTGGGCTTTGACTAATGTTGTTCAACCAGGAGATTGTATTAAGCTGCTGGCTGTCATTCCGCCTTTCTGCTCAAACATCAGGGCACTGGGTCTCTCTGGGCTTGCTTTTGCTACTGATTGTATCACTGCTCAGTGGAGATCCCGTTTAGGAACTGTCTCAGATCAAAAAGAAGTTTTTGTGAATTCATGCTCCCAAATGGTGCTTCAACTTCATCAGTTTTATGATCCAGAGAAGATAAAGATCAGAATCAAAATTCTTTCTGGTTCTTTTTGTGGAGCAGTGGCTGCTGAAGCCAAGAGAGCCAAATCAAGCTGGGTGATATTGGACAGAAAATTGAAAAATGAAAAGAAATACTGCATGGAGGAGCTGAATTGCAGTGTTGTAATCATGGAGCGATCTGGGCCAAACGTTCTGCGATTGAATTTGATCCTTTCATCAAATATGGAGCACAATGCATTTCCAAGAAACTTCAAAGGCAAATCTGAACATGCAAATACAATTAAGTGTCCAATTGTTACTCCTGGAAGTAGTCTTAAACAAGGATCAAAGACTGCTAGTATCGTTGGAACACCATCAACACCTTGGACTTGGACTTCACCATTTTATCAATATGGTAATGATGGAGGACGAAGAAAAGATTTACCCTTTTCTCAGAACGAGGTGAAAAATGTGGAGGAAGGTGTATCCAATTCAGAGTGTGAAATTATTATGAGTTTGTCATCCTGCGGGTCATATTTCCAGCCATGGATTTCAAATGCAATTTGTGGTGATGAAGAGTTTTCGAAAAACATTAACATTAACGAGGCTCTGGTTTCTCCCACCGAAGTATTGGTTCATAAATTGGATCATGATCCTGTGTTAGGAGTGCTTAATTGTAAAATTGATGTGAACATAAGCAGAAGTGTCAGAGAAGCAATTTCACTAGGCAGAAATGGCACTACTGCGTCACTCCCATTGTGCTCTATTTGTCAGCATAAGGCACCTTTGTTTGGGAATCCTCCAAGATGGTTTACATTTGCTGAACTGAAACTTGCCACTGCTGGATTTTCACAGGAAAATCTTTTGGCAGAAAATGAGGTTGGATCTGTACACCGTGGAGTCCTATCTGATGGGCAGGTTGTTGCTATCAAGCAGTGTAAATTAGCTGCTACTCAAGATGATGAAGAATTTTCTGCACAGGTTCAGGTCTTAAGCTGCACACAACATCGTAATGTTGTGATGCTAATTGGGTTTTGCTTGGAGTATGGAAGAAAAATTCTGGTTTATGAATATATCTGCAATGGATCTCTATATTCTCATCTTCATGAATATACTGAAAGTGGTGACATCACTGAAAAAGCCGATGTGTACTCGTTCGGGGTGCTATTACTGGAGCTTCTTACTGGACGCAAAGCTTTGGATAGAAGCCACCAATGCCTCCATGAATGGGGTTTGGTTGAGCGAGGTGACATCAATGAAGTTGTAGACCCAAACATAAGAAACTGCATCATTGATGAGGAACTTCATCGCATGCTGCAATGTTCCACTCTCTCTGCATCCAACACCATCCTCATTTAA 1650 0.4103 MKQKDCYRKVTGKVVVVAVEATKEVSRSGLMWALTNVVQPGDCIKLLAVIPPFCSNIRALGLSGLAFATDCITAQWRSRLGTVSDQKEVFVNSCSQMVLQLHQFYDPEKIKIRIKILSGSFCGAVAAEAKRAKSSWVILDRKLKNEKKYCMEELNCSVVIMERSGPNVLRLNLILSSNMEHNAFPRNFKGKSEHANTIKCPIVTPGSSLKQGSKTASIVGTPSTPWTWTSPFYQYGNDGGRRKDLPFSQNEVKNVEEGVSNSECEIIMSLSSCGSYFQPWISNAICGDEEFSKNININEALVSPTEVLVHKLDHDPVLGVLNCKIDVNISRSVREAISLGRNGTTASLPLCSICQHKAPLFGNPPRWFTFAELKLATAGFSQENLLAENEVGSVHRGVLSDGQVVAIKQCKLAATQDDEEFSAQVQVLSCTQHRNVVMLIGFCLEYGRKILVYEYICNGSLYSHLHEYTESGDITEKADVYSFGVLLLELLTGRKALDRSHQCLHEWGLVERGDINEVVDPNIRNCIIDEELHRMLQCSTLSASNTILI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01658 549 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 352 455 - -
Vian8g01658 549 ProSiteProfiles Protein kinase domain profile. 380 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01658 549 Gene3D Transferase(Phosphotransferase) domain 1 454 545 - -
Vian8g01658 549 PANTHER OS01G0253100 PROTEIN 467 541 - -
Vian8g01658 549 Gene3D Phosphorylase Kinase; domain 1 349 453 - -
Vian8g01658 549 Pfam Protein tyrosine and serine/threonine kinase 383 468 IPR001245 GO:0004672|GO:0006468
Vian8g01658 549 SUPERFAMILY Protein kinase-like (PK-like) 355 501 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01658 Vian-Chr8 35966802 35971885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01658 467 539 Trihelix Transcription Factor Family AT1G68690 38.554 1.56e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vian8g01658 PK_Tyr_Ser-Thr 6.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01658 - - vun:114182477 751.125