Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01657 ATGATGGCGTTGGTCAACTCAAGATTGAAGAGGGAACAATGCAACCGCACAAAACACGATTCCAGCTTCTCCCATTGGAAGATACTGATTGGCCCTTCTGATTGGGAAGATCATTCCAAAGGAAAGGAAGGTTGTGTAAGATACAGGATTCATAACCTCCCTCAGGAATCGAATCCAGGGGTGTATGAGCTTGGAATTGCTGTGTCCAATGGTGGTTTGGGGCGTGAAATTTCAAAGCTTACCCCTCATTCTCACCGCATAGTGGTGGTTTACCTTGGAGAAGCTGACAATGTGAGAACAAGACTCCAGTGTTATGGCAGAACAGGTGATCATCTGCAGAGTGGCTGTTCGAATGGTTCTTCTTCCCAAAAGGGGCGCCCCTTGTTTGAGGAAGTGTTTTCACAAGGATTATCAATCATTTATAGATGGGCTCCTATGCAAAACAAGGAAGATGCTCTGCGAACAGAAGCTCAGCTGCTCAGTACATTTGATTATGCGTGGAACACAAGGAGTAATGGTATCCGGAGGCCTGAAGAAATTCTTCAAAAGCTTCAAAAAATTGCTTCAGGCACTAGAACACTTTCAGATGTGACCAAAGTGCTACTACCATTCACTCAGAAGCAAGTGGGCATCCGAATTAAACCAAGCAAGCTACCTCAGGAAGATGACAAGTTAGATGAAGCAGACAATGGCAGCTATAATTTCCTATCTCGAGTATTCAGTTTTAACAGATCACGTCCTAGGATAGTTCAAAGTACCACTGGTGTCGTTCAGGAGCAGGAGAATGCTAAAATTTGTGGAGTGGCATTGGGTGATGGTTTGTTTTGTAGAAGGCCACCAGCTGAGAAAAGATTGAGGTGTCCCGAACACAAAGGAATGAGAGCTAATGTTTCCATTGCCGAAGCAACCAGGGTACCCAAGTCAGAGAGCAATGTTTCACAAAAAGTGGTTGGGAGTCTTGGTGATGAAAGTCTGACAGACACAAATATATGTGGAATCATCTTAAATGATGGCTCCACCTGTAGAAGAAAACCAGTTGAAGGAAGGAAAAGGTGTCATGAGCATAAAGGTAGGAGAATTGTTGCATCTGTTCAAAAAAGAGGCAACGGATATAGATACCAAAATGTCAGCCATGTTGTAGAAGATTCTCTGCAAACACTGGTAGGGAATCCTGTTGATGAGAGTATCTTGAACACAAATATATGTGGAATCATCTTAGATGATGGCTCTGCCTGTACAAGACAACCAGTTAAAGGAAGAAAAAGATGCCATGAGCACAAAGGAAGAAGAATTCATGCATCCTTTCATGTAAATAAGAAATAA 1323 0.4286 MMALVNSRLKREQCNRTKHDSSFSHWKILIGPSDWEDHSKGKEGCVRYRIHNLPQESNPGVYELGIAVSNGGLGREISKLTPHSHRIVVVYLGEADNVRTRLQCYGRTGDHLQSGCSNGSSSQKGRPLFEEVFSQGLSIIYRWAPMQNKEDALRTEAQLLSTFDYAWNTRSNGIRRPEEILQKLQKIASGTRTLSDVTKVLLPFTQKQVGIRIKPSKLPQEDDKLDEADNGSYNFLSRVFSFNRSRPRIVQSTTGVVQEQENAKICGVALGDGLFCRRPPAEKRLRCPEHKGMRANVSIAEATRVPKSESNVSQKVVGSLGDESLTDTNICGIILNDGSTCRRKPVEGRKRCHEHKGRRIVASVQKRGNGYRYQNVSHVVEDSLQTLVGNPVDESILNTNICGIILDDGSACTRQPVKGRKRCHEHKGRRIHASFHVNKK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01657 440 Pfam GIY-YIG domain-containing protein 23 181 - -
Vian8g01657 440 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 311 376 IPR038909 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01657 2 431 HRT Transcription Factor Family AT5G56780 40.123 9.17e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Vian8g01657 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01657 - - gmx:100784450 604.364