Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01637 ATGGGAAGGGCTCCTTGCTGTGACAAATCTATCGTGAAAAAAGGGCCATGGTCTCCTGATGAAGATGTCACCCTCAGAAACTACCTTGAGAAACATGGAACTGCTGGAAATTGGATAGCTCTCCCCAAGAAAGCAGAGCTGTCGTCTGAGATGGCTGAACTATCTCAGGCCTCATATAAAGCTTGGAGGTGGTCCCTCATAGCAGCTCAACTTCCCGGAAGAACAGACAATGATGTCAAAAATCACTGGAACACCAAGCTAAAGAAAAAGTTTCTAGCAGGAAACACTGGTAGTAGTACTGTTGCCACAAGCTACAACAATGGCACTGTCAGCGGTGCTACTTCTTCTGACCAATTCTCATCTACTATTCAACCTCAAGTTGATGCCTTTGTCTTGAATCAGAAACTGAACTCAGCTTGGTTTGACTCCTACAATAATCTGAATCTGGAACAAACACCAATTTCAGTTCCTCTTCCAATGCCTCAGGAATTAGTATCATTTAATTATAGTGCACCACCCTCTAATGAAATTTCATTGCCAACTTTCAATGCAGCTTCATTAGCACAGCAGAATGAAGATATACAATGGTTTGGCTATGACTATGCAGAGGAAAATGATCCAAATTTACTTGCTTTTGTGCTTGATGATCTGCTGATGAATCATGGGTCAGCATCTTCTGATCACATTGCTTCGTCATGTGTGGCTAACCAAGACTCGTTCTACTCATCAAAAGCTTGA 738 0.4228 MGRAPCCDKSIVKKGPWSPDEDVTLRNYLEKHGTAGNWIALPKKAELSSEMAELSQASYKAWRWSLIAAQLPGRTDNDVKNHWNTKLKKKFLAGNTGSSTVATSYNNGTVSGATSSDQFSSTIQPQVDAFVLNQKLNSAWFDSYNNLNLEQTPISVPLPMPQELVSFNYSAPPSNEISLPTFNAASLAQQNEDIQWFGYDYAEENDPNLLAFVLDDLLMNHGSASSDHIASSCVANQDSFYSSKA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01637 245 SMART sant 13 89 IPR001005 -
Vian8g01637 245 ProSiteProfiles Myb-like domain profile. 9 87 IPR001005 -
Vian8g01637 245 CDD SANT 16 87 IPR001005 -
Vian8g01637 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 91 IPR017930 -
Vian8g01637 245 Pfam Myb-like DNA-binding domain 14 85 IPR001005 -
Vian8g01637 245 SUPERFAMILY Homeodomain-like 14 88 IPR009057 -
Vian8g01637 245 Gene3D - 12 91 - -
Vian8g01637 245 PANTHER OS09G0431300 PROTEIN 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01637 Vian-Chr8 35872059 35873329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01637 1 93 MYB Transcription Factor Family AT5G57620 52.941 4.05e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian8g01637 Myb_DNA-binding 5.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01637 K09422 - gmx:778160 257.299