Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01631 ATGGAGAATAGCTGCATTCTAGCCTTTCTCATCTTCATTCTACATTCAAGTACAACGAAAGCTGTCTTCAGTGTTGGTGGTGGTGTTGGTGTTGGTGTAGGTGTAGGTGTAGGCGTTGGTGTTGGTGTTGGCAATGGAAATGGGGGTGGCAATGGTGGAATGGTTTGGGTTGGAGGAGGGATTAACAGCCCAGAGCCCCCTGGATATTCAGTGCCAAAGCCTGAAGGAGCTTACACAGCTCTCCAAGCTTGGAAATCTGCAATCACTGAGGACCCTCTTAATGTTTTAGAAAGTTGGGTTGGTCCAAATGTGTGTTCTTACAAAGGAGTCTTCTGTGCAAATCCTCAAGATGAAATGGTTGCATCAGCTTTCCCAGTTGTTGCAGGCATAGATCTCAACCATGCAAATCTGAAAGGAACTCTCGTCAAAGAGCTGTCTCTACTCAGTGATTTGTCTCTTCTCCACCTCAACACGAACAGATTCACGGGTTCTGTTCCTGATACATTCAGAGAGCTGGTGTTTCTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCAGGTCCTTTCCCTTATGCTACCTTGTACATGCCAGGCCTCATCTACTTAGACCTAAGATTCAACTACTTCTCTGGGGCCCTTCCTGAGGAACTTTTCAGCAAGAATCTGGATGCAATATTTCTCAATAACAACCAGTTTGAAGGTGAAATTCCCCAAAACTTGGGTAGCTCCCCAGCCTCGGTGATAAACCTGGCCAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTGGGCTTCATGGGTTCTAAAATAAAGGAGATTCTGTTCCTCAATAACCAGTTAACTGGTTGCATCCCTGAAGGAGTGGGGCTATTCACAGAGATGCAAGTTTTGGATGTGAGCTTCAACTCACTTATGGGTCATTTGCCAGACACGCTGTCATGCCTTCAAGACATTGAAGTTCTGAACTTGGCTCATAACAAGCTCTCTGGGGAGTTATCAGACGTAGTGTGCTCTTTGAGAAGTCTTGCAAATCTAACTGTTGCTTACAATTTCTTTTCGGGGTTCAGCCAGCAATGCTCAAGGCTTTTCTTTAGGAATGTGGGTTTTGATTTCTCCCTAAACTGCATTCCTGGGAGAGACATGCAGAGACCTCAACCTGAATGCTCTGTCATCCCAGGTGGTAGCCTTAGTTGTCTCAGAATCCCCACACCAAGGCCTCTTGTTTGTGGTTCAATGGCTGTAAGTAACTCTAAGCACATTGATCCTTGA 1269 0.4555 MENSCILAFLIFILHSSTTKAVFSVGGGVGVGVGVGVGVGVGVGNGNGGGNGGMVWVGGGINSPEPPGYSVPKPEGAYTALQAWKSAITEDPLNVLESWVGPNVCSYKGVFCANPQDEMVASAFPVVAGIDLNHANLKGTLVKELSLLSDLSLLHLNTNRFTGSVPDTFRELVFLEELDLSNNQLSGPFPYATLYMPGLIYLDLRFNYFSGALPEELFSKNLDAIFLNNNQFEGEIPQNLGSSPASVINLANNKLSGNIPASLGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTLSCLQDIEVLNLAHNKLSGELSDVVCSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPRPLVCGSMAVSNSKHIDP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01631 422 Gene3D Ribonuclease Inhibitor 244 366 IPR032675 -
Vian8g01631 422 Pfam Leucine rich repeat N-terminal domain 78 112 IPR013210 -
Vian8g01631 422 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 68 402 - -
Vian8g01631 422 FunFam Leucine-rich repeat extensin-like protein 1 78 242 - -
Vian8g01631 422 PRINTS Leucine-rich repeat signature 315 328 - -
Vian8g01631 422 PRINTS Leucine-rich repeat signature 175 188 - -
Vian8g01631 422 SUPERFAMILY L domain-like 77 361 - -
Vian8g01631 422 Gene3D Ribonuclease Inhibitor 77 243 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01631 Vian-Chr8 35810056 35811324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01631 69 400 Leucine-rich Repeat extension Gene Families AT3G24480 48.817 5.80e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01631 - - gmx:100775544 720.309