Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01620 ATGGGAAACAAAATCGCGCGCACGACGCAGGTTTCGGCGTCGGAGTACTACCTGCATGACCTGCCGTCGACGTACAATCTGGTTCTGAAGGAGGTGTTAGGTCGCGGCCGTTTCTTCAAGTCTATTCAGTGCAAACACGACGAGGGTTTGGTACTCGTCAAGGTCTATTTCAAGCGCGGCGATTTCCTCGATCTCTCCGACTACGAACGCCGTCTCTCTCAGATCAAACAAATCTTCACCTCTATCGATCACCCTCACGTTTGGCCGTTTCAGTTTTGGCAAGAAACGGATAAAGCAGCCTACCTTTTGAGGCAGTATTTCTTTCATAATCTGCATGATAGGTTAAGCACTCGACCTTTTCTTTGTCTTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTGTAGCTGTAAACCAGTGCCACGAGAATGGAGTGTGTCACGGTGATATCAAGTGTGAGAATGTGCTGATTACCTCCTCCAATTGGCTTTACCTTGCTGACTTTGCCTCTTTCAAACCCACATACATTCCATATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACTGGTGGACGAAGACTATGTTATCTTGCACCTGAGGATATAGTTCTATTTACTATAATTATTACTAAATATTTCCTGCCTATCCTAACTCCTACATCAGTTAGGATAGTAGCTCTTCAACTGGTCGGCTCAGGTTTTTCACTGCTTCCCATCGCTCGGCTCGAGCTCTCACCGCCTTCAGCCGTTCGGCTCAACTCCTCATCGCCTTCCACCGTTTGGCCTGACCTCTCTCCGCCTTCCACCATTTGGCCTGACCTCTCTCTGCCTTCCACCAGATTTTATGAACATGGAGGGGAGATGCAGGTGGCACAAGATACCCCCTTAAAACCCTATATGGATATATTTGCTGTTGGGTGTGTAATAGCTGAACTTTTCCTTGAGGGGCAGCCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGCCAATATGATCCAAGTCAACACCTTGAAAAAATACCAGATATTGGGATCCGTAAAATGATATTGCACATGATCCAGTTAGAACCAGAGTCCCGATTTTCTGCTGAAAGATATCTGAAGGAATATGCTGCAGTTGTTTTTCCGATTTATTTTTCACCATTTCTTCATGATTTTTACCGTTGCTGGAGTCCTCTTCATTCCGACATGAGGGTTTTACTATGCCAAAGTGCTTTTCCGGAGATACTTAAACAAATGATGGACAATCAGTCATATGATGATGTAGCTGCTACTTCTGGGGAACTTTTGGAAGAGATGGTTGCTAAAGGAAGAAATGCACATAATTCAACCTTCCCTGAAAATCTAACAAATCTGCAAACTGGTAAACTGCTTCAAACTATCTCCAATGCTTTTCGAGGAAATGATCATCCATTTTTGAAAAGTATTGCCATGGATGATTTGAATTCATTGATGTCTGAGTATGATAGTCAATCGGATACATTTGGAATTCCTTTTCTACCTTTACCAAAGGATAGTATGAGATGTGAAGGCATGGTGTTGATAACTTCTTTGCTGTGCTCTTGCATCCGCAATATCAAGTTGCCTCACCTGAGGAGGGCAGCTGTGCTCTTGTTGAAGGCGTCTGCCCTATATGTTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTGATTGTAATGCTTTCAGATTCAGCAGCAATTGTCCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTTCCCTTAGTGAGGGATTTTCCTCCCAGTGATGCGAAGATATTTCCTGAGTATATTCTTCCAATGCTTTCTATGCTTCCTGATGATCCTGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAACTGGCACTGACTGCTTATGGATTCCTGATACACTCAGTAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTTGTCACAGAAACCGTTGACATCATCCAATCAGACTTCTGGAAGAATGAAAAGGATAAATGGCGAAGTTCAACTTCTGCAGCTGAGGAAATCCATTGCGGAGGTTGTCCAAGAACTTGTTATGGGTCCTAAGCAAACCCCAAATATAAGGAGAGCACTTCTTCAGGATATTGGCAAACTGTGCTACTTCTTTGGTGTGAGACAGAGTAATGACTCTCTTTTACCCATTCTTCCTGCTTTCTTAAATGATCGGGATGAGCAATTAAGGACAGTATTCTATGAAAAAATAGTTTATGTCTGCTTTTTTGTGGGGCAAAGAAGTGTAGAAGAATATTTATTACCTTATATTGAGCAAGCTTTAAGTGACATGACGGAATCAGTCATCGTTAAAGCTGTAGAATGTATGTCTATTCTATGTAAAAATGGTTTCTTCCGTAAGAGGACATTACTTCAAATGATAGAGCGTGGCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGGAGATCGATTGTCTCTTTTATTGCTGCTAGCAGTGAGTGCTTGGGTGCAGTAGATTCTTATGTTTTCCTTGCTCCTGTTATACGGCCTTTCCTCCGCAGGCAGCCTGTGTCTCTTGCTTCTGAGAGGGCTCTGCTTTCGTGTTTAAAACCTCCCGTCTCAAGACAGGTTTTCTACGAAGTCTTGGAGAACTCCAGGAGTTCGGACATGTTAGAAAGACAAAGGAAAATATGGTATAGTTCTTCACAGTCTAAACTATGGGAAATGGATTTACTGAAAAAAGGAATTGAAGAGTTGGACTCATTAAACAACTGGACTGACAAGCAACAAGGTCCTGGGGTTCAACAAACTGTCAGCACTGGCTTCCAACAGCCAGGGATAATTGATTGTGACAAAGCTGAGGCAAAATTGAGAGACATGGGAGCCTTTGTGCATAATGATAGCAATGCTGCAGGACATCGTGATACTCAATGCATGGAGAAGTTACAGTTTTCAGGATTTATGACACCAAATTTTAGTGGTGTAAACAGTTTGACTTATGAAAAGCCGTCAGAAGGCATACCTCTGTACTCCTTCAGTGTGGACCGGCGGGGAATGGGAATTCTGCCTGCTGCATCTGATCCTCCATTGCCAATGAGTTCTCTGGGTTTTAGTTCATCTGCAATGCCCTGGGTTAATCCACTAAGCACGTCCTTTAATTTGGCTAGTTCAGTTCCAGCACCAAAGCTTTTTTCAGGTTCGTTTAGCATCAGCAATGGCTCTAAACAGTTCCATCGAGTGGTACATGAACCAGATGCCAGGGAAAATGAGACTGCCTATGTTAATAGCACGTTTCAAGATTTGGGATCATCTGCTAATGTTCAAGGCACTTCAATTGCTATGGAAGATGCAACTGCCCAAACTGATCTATCAGGATTTCCATCCCATGCTCGAGTTTCCATTCCTGATTCTGGTTGGAGGCCCCGTGGGGTGTTGGTTGCACACCTCCAGGAGCACCGATCAGCCGTCAATGACATTGCTATATCTGCTGACCATAGTTTCTTTGTGAGTGCATCTGATGATTCTACAGTCAAGATTTGGGATTCCAGAAAGCTAGAAAAAGACATTTCATTCAGGTCTAAGCTAACTTATCACCTGGAGGGAAGCCGAGTGTTGTGTGCAGCAATGCTTCCAGGTTCTGCACAAGTTATAATTGGAGCGTCTGATGGATTTATTCATATGTTTTCTATTGATCATATGTCTAGAGGTCTAGGAAACGTTGTCGAGAAATATTCTGGCATTGCTGATATCACAAAGAAGGATATCAAAGAAGGTGCCATACTCAACCTATTAAATTGCCCTGTGGATAATTATACCATTATGGTCATCCCGGGGGGTTGCAATGAATTCTGTCATTTATCCAAGACGGAATGTTCATCGCAAGTATGGAGTTTTGTGCCGAACTTTCAATATGGCCCGAGTAGTTGGCTTTTGGTTGATTATTGTTCCAAGTTTGTCATTTCTGAGACAAAAAGACGTGTCTTACACTACGAAGGGCTTGTCACCCTCCTTAAGGTTGTGGGCAAGAAAGTTTGTGTCATCTGTCATCAGGAAAGATTGAGAGCCGTAATCATTATAACCAATATATGCTATTGCTCCTTAATGGACTTGAACATAGCTGTGATTTCAATATTTGACGAAGTCATCATAGAGAGAGTGCATAATCTGATCCTCCACCCCCTAACCTCCCAAACTTTCAAGTTTCATCACACAGAAATACAAAAAGCAATATGCTCACCAGGGGAGAACTACCAGAACTTGTCCAAGATTCATAAATGCTCTGTGATGAGTTATCAGGTCAGCATTCAAGAGTTGTGGGGTCCCCTAACCCGCCATACACTCATAAGGATCACCCTCGTAGTTTTACCAGGGAAATGCTTTTATGGTGGTTTGATGCTCACTCGAACGGAACGTTCCCAGGGAACTCCTACTCGGTCGTTATGCTCTCTAGGAAAGAAGAAGAAAAGAGAAGAGAGAGAGAAATCCCAAGCTCCATTTTTGTCCACTAGGAAAAACGTGGGGCTTGTAATGATGCAAGAAAATGCATTACCCTTTATGGGTGCCCACAGAGTTTCTCTGATTCACCAACCACATGGAATTTACCACTCATCCAGAAAATCTGAACCATTACCAAGTGCTCAAATAACTCTAATCAGCTAA 4659 0.4286 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFLDLSDYERRLSQIKQIFTSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLCLVEKKWLAFQLLVAVNQCHENGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPEDIVLFTIIITKYFLPILTPTSVRIVALQLVGSGFSLLPIARLELSPPSAVRLNSSSPSTVWPDLSPPSTIWPDLSLPSTRFYEHGGEMQVAQDTPLKPYMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDIGIRKMILHMIQLEPESRFSAERYLKEYAAVVFPIYFSPFLHDFYRCWSPLHSDMRVLLCQSAFPEILKQMMDNQSYDDVAATSGELLEEMVAKGRNAHNSTFPENLTNLQTGKLLQTISNAFRGNDHPFLKSIAMDDLNSLMSEYDSQSDTFGIPFLPLPKDSMRCEGMVLITSLLCSCIRNIKLPHLRRAAVLLLKASALYVDDEDRLQRVIPYVIVMLSDSAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSVSLSEAGVLDELSLSQKPLTSSNQTSGRMKRINGEVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMTESVIVKAVECMSILCKNGFFRKRTLLQMIERGFPLLCYPSEWVRRSIVSFIAASSECLGAVDSYVFLAPVIRPFLRRQPVSLASERALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIEELDSLNNWTDKQQGPGVQQTVSTGFQQPGIIDCDKAEAKLRDMGAFVHNDSNAAGHRDTQCMEKLQFSGFMTPNFSGVNSLTYEKPSEGIPLYSFSVDRRGMGILPAASDPPLPMSSLGFSSSAMPWVNPLSTSFNLASSVPAPKLFSGSFSISNGSKQFHRVVHEPDARENETAYVNSTFQDLGSSANVQGTSIAMEDATAQTDLSGFPSHARVSIPDSGWRPRGVLVAHLQEHRSAVNDIAISADHSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRVLCAAMLPGSAQVIIGASDGFIHMFSIDHMSRGLGNVVEKYSGIADITKKDIKEGAILNLLNCPVDNYTIMVIPGGCNEFCHLSKTECSSQVWSFVPNFQYGPSSWLLVDYCSKFVISETKRRVLHYEGLVTLLKVVGKKVCVICHQERLRAVIIITNICYCSLMDLNIAVISIFDEVIIERVHNLILHPLTSQTFKFHHTEIQKAICSPGENYQNLSKIHKCSVMSYQVSIQELWGPLTRHTLIRITLVVLPGKCFYGGLMLTRTERSQGTPTRSLCSLGKKKKREEREKSQAPFLSTRKNVGLVMMQENALPFMGAHRVSLIHQPHGIYHSSRKSEPLPSAQITLIS 1552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01620 1552 Gene3D - 643 870 IPR011989 -
Vian8g01620 1552 Pfam Protein kinase domain 29 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01620 1552 FunFam Protein kinase family protein / WD-40 repeat family protein 654 864 - -
Vian8g01620 1552 SMART serkin_6 27 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01620 1552 MobiDBLite consensus disorder prediction 1483 1498 - -
Vian8g01620 1552 Pfam WD domain, G-beta repeat 1145 1181 IPR001680 GO:0005515
Vian8g01620 1552 Pfam HEAT repeat 558 586 IPR000357 GO:0005515
Vian8g01620 1552 CDD STKc_Vps15 16 382 - -
Vian8g01620 1552 Gene3D - 460 642 IPR011989 -
Vian8g01620 1552 Gene3D Transferase(Phosphotransferase) domain 1 22 206 - -
Vian8g01620 1552 ProSiteProfiles HEAT repeat profile. 726 764 IPR021133 -
Vian8g01620 1552 SUPERFAMILY ARM repeat 353 853 IPR016024 -
Vian8g01620 1552 SUPERFAMILY WD40 repeat-like 1142 1412 IPR036322 GO:0005515
Vian8g01620 1552 SMART WD40_4 1142 1181 IPR001680 GO:0005515
Vian8g01620 1552 SMART WD40_4 1190 1229 IPR001680 GO:0005515
Vian8g01620 1552 SUPERFAMILY Protein kinase-like (PK-like) 25 371 IPR011009 -
Vian8g01620 1552 MobiDBLite consensus disorder prediction 1474 1498 - -
Vian8g01620 1552 Gene3D Transferase(Phosphotransferase) domain 1 246 376 - -
Vian8g01620 1552 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1149 1181 - -
Vian8g01620 1552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Vian8g01620 1552 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 504 643 - -
Vian8g01620 1552 ProSiteProfiles Protein kinase domain profile. 27 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01620 1552 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1124 1190 - -
Vian8g01620 1552 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1329 IPR045162 GO:0004674|GO:0016236|GO:0045324
Vian8g01620 1552 Gene3D - 1072 1250 IPR015943 GO:0005515
Vian8g01620 1552 ProSiteProfiles Trp-Asp (WD) repeats profile. 1149 1181 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01620 31 201 AGC Kinase Gene Family AT3G08730 25.967 2.36e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Vian8g01620 Pkinase 2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01620 K08333 - gmx:100818467 1863.2