Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01618 ATGGGGAGAGTCACAAGGTGGATGAAGAGTTTGTTTGGAATTTCAGGAGAGAAAGAGAAGAAACAAAACATCATGGAATCTGGTTTTTCTGAGAGTAGTAATAATTCAAGAGTTTTGTGTCACAATCCAGGAACTATACCTCCCAACATTTCTCAAGCTGAGGCAGCTTGGTTACAGTCATTCTACACAGAGAAGGACAAAAACAAGCACGCCATTGCGGTTGCTGCGGCAACCGCAGCTGCGGCTGATGCTGCTGTGGCGGCAGCACAGGCCGCCGTTGCAGTTGTTAGGCTCACAAGCCAAGGAAGGGGTGGCACCATGTTTGGCGTTGGACCTGAGATATGGGCTGCTATCAAGATTCAAGCACTGTTCAGAGGATACCTGGCAAGGAAGGCACTGAGGGCATTAAAAGGATTGGTGAAGTTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACACTGCATAGTATGCAGGCTCTTATTAGAGCTCAAGCTAGAATACGGTCCCACCAATCTCGCAGGCTCATGAGTACGAAGAATGAAGCATTTAGATCTCAAAATAGAGCAAGAAGATCCATGGAGAGGTTTGATGATACTAGGAGTGAGTATGCAGTTCCAATCCACAACAGAAGAGCATCATCTTCTTTTGATGCTACACTTAACATCAACAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTAGACACTTTCAGGCCTAAGTCAAGATCAAGAAGAACAATATCAGATTTTGGTGATGAGCCATCACTTCAGGCACTTTCCTCTCCCTTCTTTCCAATTTCATATAGAGGTACCCCTACACGTTGGTCCATACCAGATCAAAGGAATTTTCAGGACTCTGAATGGGGGTTAACAGGAGAAGAAGGTCGGTTCTCTACAGCACAAAGCACTCCACGCTTCACAAATCCTTGTAGTTGTGACTCAGTTGTACCTATGACACCACAAAGTGTGTGTCCTGATGATAACTTGTTCCTAAGGCAATATGGGAAATTTCCAAACTACATGGCTAGTACTCAGTCTTTTAAGGCCAAGTTGAGGTCTCATAGTGCTCCAAAGCAACGACCAGAACCAAGTCCAAGGAAAAGGCTCTCCCTCAATGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGTATTAGAATGCAGAGGTCTTGCTCAAAGGCTCAAGAAGTCATTAATTTCAAGAATGCTGTGATGGGAAAGCTTCAGAAATCCACAGAATCTGTTAGGGAAACAGACAGAAACTATTTCCACCAGAGAGGATGGTGA 1302 0.4493 MGRVTRWMKSLFGISGEKEKKQNIMESGFSESSNNSRVLCHNPGTIPPNISQAEAAWLQSFYTEKDKNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGGTMFGVGPEIWAAIKIQALFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQARIRSHQSRRLMSTKNEAFRSQNRARRSMERFDDTRSEYAVPIHNRRASSSFDATLNINNSVDGSPKIVEVDTFRPKSRSRRTISDFGDEPSLQALSSPFFPISYRGTPTRWSIPDQRNFQDSEWGLTGEEGRFSTAQSTPRFTNPCSCDSVVPMTPQSVCPDDNLFLRQYGKFPNYMASTQSFKAKLRSHSAPKQRPEPSPRKRLSLNEMMESRSSLSGIRMQRSCSKAQEVINFKNAVMGKLQKSTESVRETDRNYFHQRGW 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01618 433 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Vian8g01618 433 Pfam Protein of unknown function (DUF4005) 310 389 IPR025064 -
Vian8g01618 433 PANTHER IQ-DOMAIN 5-RELATED 1 382 - -
Vian8g01618 433 Gene3D - 89 138 - -
Vian8g01618 433 ProSiteProfiles IQ motif profile. 116 141 IPR000048 GO:0005515
Vian8g01618 433 Pfam IQ calmodulin-binding motif 115 134 IPR000048 GO:0005515
Vian8g01618 433 Pfam IQ calmodulin-binding motif 140 154 IPR000048 GO:0005515
Vian8g01618 433 ProSiteProfiles IQ motif profile. 161 190 IPR000048 GO:0005515
Vian8g01618 433 SMART iq_5 112 134 IPR000048 GO:0005515
Vian8g01618 433 SMART iq_5 135 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01618 Vian-Chr8 35698613 35700183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01618 1 392 IQD Protein Family AT3G16490 49.752 1.19e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01618 - - gmx:100788710 638.262