Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01567 ATGCATAGAGCTGTTCTTCAGAGCTCACCAGTGCAACAAATGATGGCTGGAAACCCTAACTGGTGGAACATCAATATCAATACCATGCCTCCACAAGCTCCTCCTTTCTTCTCCACTCCTTCAAACTTTTCCATCCCTTATGCTCCCTCTTCTCTCCCCTTTCCTTCTTGGAATGAAAATCAAGACCTTCCTGATTCATGGAGCCAGCTACTCATGAGTGGGGTGGTGGATGAACAAGGTAAGGTTGGGATGGGCCAGTTTCAGACAAAGAAGTTGGAGAACTGGGAGGATCAAATGCTAGGTCAGCCTCCAAACGCTTCTCTTGTTGATGTTAAGCAAGAAAATTCAGTTAACAGCTATGTATACGGCCATGGAAACGAAGAGCTTCAGTCATCAAAGCCATCCTGGTCTCCGAAATCCTGTGCCACTAGTTTCAGTAGCAACATGTTAGATTTCTCTAACAGTAATAGCACAGATGCAAGGCTTCCTCCACCAGATCGATCTTCTGAGTGCAATAGCACTGCAGCTGGTGGGGCACTGAAGAAAGCTAGGGTTCAACCCTCTGCTACAACACAGGCTACATTCAAGGTCAGAAAGGAGAAGTTAGGCGACAGAATTACAGCTCTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACAGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGAGCGGTGGACCAGGGAGTGTGAGGCAGCAGAATTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATAATGAGAACTGCTTGAAAAGGAAAGCAGCTAGAGAACCGGATACTGAAGAAAAGAAGGGGCTGAGGAGTAGAGGATTGTGTCTGGTTCCAGTGTCGTGCACACTGCAAGTTGGAAGTGACAATGGAGCAGACTATTGGGCACCTGCCCTAGGAGGGGGCTTTCGTTAG 999 0.4705 MHRAVLQSSPVQQMMAGNPNWWNININTMPPQAPPFFSTPSNFSIPYAPSSLPFPSWNENQDLPDSWSQLLMSGVVDEQGKVGMGQFQTKKLENWEDQMLGQPPNASLVDVKQENSVNSYVYGHGNEELQSSKPSWSPKSCATSFSSNMLDFSNSNSTDARLPPPDRSSECNSTAAGGALKKARVQPSATTQATFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSGGPGSVRQQNSVQGEKNCIFPEDPGQLLNNENCLKRKAAREPDTEEKKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01567 332 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 75 314 - -
Vian8g01567 332 MobiDBLite consensus disorder prediction 154 180 - -
Vian8g01567 332 Gene3D - 186 245 IPR036638 GO:0046983
Vian8g01567 332 MobiDBLite consensus disorder prediction 154 175 - -
Vian8g01567 332 FunFam transcription factor bHLH68 isoform X1 193 246 - -
Vian8g01567 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 246 IPR036638 GO:0046983
Vian8g01567 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Vian8g01567 332 CDD bHLH_AtbHLH_like 194 243 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01567 Vian-Chr8 35183348 35186714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01567 1 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.678 1.04e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01567 - - gmx:100786555 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01567 8 35183348 35186714 Vian8g01567 8 35183348 35186714 ECH
Vian1g04034 1 63421356 63424184 Vian8g01567 8 35183348 35186714 PCT