Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01556 ATGTATAGACCATTCATGACATGTGATGATCCAAAAGGGGTAGTTGAGTGTGGGGCTATAAGAAAATACAGGACCAGTTCTCAGAAAATGAAGGACAAGACAAAAACTAGGAGGCCGGCTGAGACATCATTGGCTAACAAACAAGACAAAGAGGAGAAGGTTTCAAAAGGATCCGCTGAAAGGTCTTTTGATCCATCATCCTTGCAGCTCATGGAGGTTTCTAGAGGAGCTCAAAGGTTGAACAACATGATTGATTCATGGTCTAGGGGTCTTATGTATGATGGAAGTTCTGAAGATATAGCAAAAGATTTGCTAAAAGGGGCTCTTGACCTGCAAGAATCTCTACTAATGCTGCGCAAGGTGCAAGAAGCTTCACAACACATGGCTACCTTGAAGAGAAGACAAAATGGGAAACCTGAAAGCAGCAGATTTGATGCAATGCCGGTTGATGGAACTGCACATTGTGATCACTTTGGTGAACAAAGTTATCAAATGGGGTTCCGAAGACGTTGGCCTTCAGCTGATGGTTCTTCAAGTAGCTGCACTGAGGAGCTTAAGAAAGTGATTAAGGAGAGCCTGGTTAGTCAAAATTTGTTCAAAACCACTGAAGGGTTGGATTCATCATCCACATTCCACTCCACAAACTCAAGCCAATCTTCTGGGGCTTGGAATGATAAGCTTTCTGATTCTTCTTTCTCACCAACAACTTCGAGGAGGGAAAGACGATCCAATCTGGTTGCCAAGCTGATGGGTTTAGAAGAAGCCCCTTCAAGATCATTCCCAGCTGTTATACAGAAACAGCTGGAGAGTCCAAAGATTCTGAATCAGAAGAGACATGTATTTGACATAGATATGCCTAAGGTGAGAAAAAATGTTGAGAATGTTAGTCTGGAACGTAAGATGACCTTGAAGGAAATTCTTGAGACTACTCATTTCAATGGACTTTTGAAGAAGAGTCCTGTCAGAGAGCATAATGTTCATGTCCATCCTTCCTTTGATGCTCACTACAAACATGTTGGTGATTTACCTCCTATTGTACTTATGAAACCTCGATGTAGTCCATATCAGGAATGTGTGAACAGTTATGACCATGTTGTTCCTCCAGAAAAGTTATCCCTCAGAAATCTAAAAGCAAAAGTTGCCCCTTCCAAAGTGTTCCAACACAAGGAAGACTCAACCACCAACGTGGGGAGAAAAATGGAAGAACATTTATCCAAAAGGCTTACCAAAGAGGAAAGAACTAAGCTCGTCAGAGAGGTTGTGGAGTTGAAGGAGAAAGAAATCAAGCCTATTGAAAACGAGAAGGCTCCAGGAGGTAAGGTAAGACTGCCTAGTCATGTCAGTCACAAATCACATGTAAATGAAACTGTTGATAGAAAAGCTAAGGTGAAGACCATTGCCACTAGTAGAAAGCTTTCGCAAAAGGAGGTTTTAAAATCCAAACATCAACAACAAAATCTTATACCAGTAGTTGAGGTTTCGAAACCCAAATTTGTGACAAAATCCCAAGAAGATCAAGGAGAAATCAGCTCTACAAGTACCAAGATTAGGAAGCCACAAAGTGGCTCCCGAAGTGAAAAGAATGAGACTCCCAGCAGAAAGAGCACTGTTTCAAATTCAAATACCATATCAAAACCAAAGAGCCAAAAGATTACTTATTCCAAGGAACAGAATAAGAAACAGATGAAGAAGCAAAGGCCTGCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTCGATCAACAGTTAGGCCAAGAAGAAGCAATGAGTGTTGCTGTTTCTCATAAAGATGATTGCCCTGAGATTAGAATAATAACTACAATAGCAGATGATCTTGCGATGGATCATGAAGAAGTATATGCATCTGCAAGTAAGATTAGAGAAGTTTCTGAGCAAAACCAGAGTTCTTCTAGTGATGATTACTCTATGGTCAAGTCTGAACGTGAAAATGATATCATTCTTGCTGAGAAAGCTCATGACATCATCAATATCAGTGAAACAGATTACAAGCCTGACAAAGACAATTCTGAGCTTAAATATTTGCTTCTGACAAGTCAATCATTTATTGAGCATGCAGAGAAGTTCCTCAATCTTGATGTTGACTGTCCCAAGCTCCTACCAAAAAGTGAAACTAAGCGAATATCCAATCTCATACTCTTTTTGGACTGTGCAAATGAAGTCACTGAGCGTAAAAGCTTGCAGGGATCACATGCAGTTAACCCTTTATTGCTAACTTGTGCGGGGAATCCAAGATTGCACATTTCTTTAGGGAGGTTGGTTGATGAAGTGTGTAGTGCCATTGAGCATCTAACATCTTACAGTGAAAAAGTGGCTTCAGATAATATATATGCAATGATGGAGAGAGATATAAAGGGAAACAATGGACTGATAAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTACTGCAGATGAAGCTGAGCAAGTTGTGAATGAAGTAGAGGACCTAGTTTTAGGTGGATTGATTGAAGAGATAATTGGAAATTTATGA 2511 0.4046 MYRPFMTCDDPKGVVECGAIRKYRTSSQKMKDKTKTRRPAETSLANKQDKEEKVSKGSAERSFDPSSLQLMEVSRGAQRLNNMIDSWSRGLMYDGSSEDIAKDLLKGALDLQESLLMLRKVQEASQHMATLKRRQNGKPESSRFDAMPVDGTAHCDHFGEQSYQMGFRRRWPSADGSSSSCTEELKKVIKESLVSQNLFKTTEGLDSSSTFHSTNSSQSSGAWNDKLSDSSFSPTTSRRERRSNLVAKLMGLEEAPSRSFPAVIQKQLESPKILNQKRHVFDIDMPKVRKNVENVSLERKMTLKEILETTHFNGLLKKSPVREHNVHVHPSFDAHYKHVGDLPPIVLMKPRCSPYQECVNSYDHVVPPEKLSLRNLKAKVAPSKVFQHKEDSTTNVGRKMEEHLSKRLTKEERTKLVREVVELKEKEIKPIENEKAPGGKVRLPSHVSHKSHVNETVDRKAKVKTIATSRKLSQKEVLKSKHQQQNLIPVVEVSKPKFVTKSQEDQGEISSTSTKIRKPQSGSRSEKNETPSRKSTVSNSNTISKPKSQKITYSKEQNKKQMKKQRPAVAEPEAAKPVDQQLGQEEAMSVAVSHKDDCPEIRIITTIADDLAMDHEEVYASASKIREVSEQNQSSSSDDYSMVKSERENDIILAEKAHDIINISETDYKPDKDNSELKYLLLTSQSFIEHAEKFLNLDVDCPKLLPKSETKRISNLILFLDCANEVTERKSLQGSHAVNPLLLTCAGNPRLHISLGRLVDEVCSAIEHLTSYSEKVASDNIYAMMERDIKGNNGLINGIWNWGWRHGFTADEAEQVVNEVEDLVLGGLIEEIIGNL 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01556 836 MobiDBLite consensus disorder prediction 204 240 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 532 551 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 499 582 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 25 59 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 25 65 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 432 462 - -
Vian8g01556 836 Coils Coil 406 426 - -
Vian8g01556 836 PANTHER OS01G0228800 PROTEIN-RELATED 1 835 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 503 519 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 552 570 - -
Vian8g01556 836 MobiDBLite consensus disorder prediction 448 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01556 Vian-Chr8 35109564 35112568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01556 668 833 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 33.333 5.33e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01556 - - gmx:100797863 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01556 8 35109564 35112568 Vian8g01556 8 35109564 35112568 ECH
Vian1g04044 1 63479678 63482806 Vian8g01556 8 35109564 35112568 PCT