Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01529 ATGCATTTGGGTTTGTTTGGAAAAACAAAAGGGAAAACGTTTGAGACTGTTGATCCAAGAACAGAGGAAGTGATTGTTGAAATAGCAGAAGCTACCAAAGAAGACGTTGATATTGCTGTGAAGGCTGCACGTGAAGCATTTGATTTTGGTCCATGGCCACGTATGCCCGGTGCTGAAAGAGCAAAGATTATGCTGAAATGGGCGCAACTAATTGAACAGAACGTAGAAGAAATAGCAGCATTGGACACCATTGATGGAGGGAAGCTTTTCAGTTGGTGTAAGGCTGTGGATGTTCCTGAAGCCTGCAACATCCTACGTTACTATGCTGGCGCTGCTGATAAAATTCATGGAAATGTGTTCAAAACATCTCGTGACCTCCACTTGTATTCTCTTATGGAACCTGTTGGTGTTGTTGGTCACATTATCCCTTGGAATTTCCCTACTGTCATGTTCTTCGCCAAGGTCGCCCCGGCCTTGGCTGCTGGTTGCTCCATGGTCATCAAGCCTGCTGAGCAAACACCTCTCTCATCACTCTTCTATGCTCATCTTGCTAAGTTGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAACTGCAGGGGCTGCAATAAGCTCACATATGGACATTGATGCGGTCAGTTTTACAGGTTCAACAGAAACAGGTCGTAAAATAATGCAGGCTGCGGCCTTGAGCAATTTGAAACCTGTTTCTCTTGAATTAGGAGGAAAGTCACCAGTGTTGATTTTTGATGACGCTGATATAGACAAAGCTGTTGATCTTGCTCTCTTTGGCATCCTACACAACAAGGGAGAAATCTGTGTTGCATTCTCCAGAGTTTTTGTCCAGGAAGGGATATATGATGAATTTGAGAAAAGGGTTGTGGAGAAGGCTAAAACTTGGGTAGTAGGAGACCCTTTTGATCCAAAAGTTCAACAGGGACCCCAAACTAGTAAGGCACAATTTGATAAAATTCTTTCCTATATTGATCATGGAAAGAGTGAAGGAGCCACTCTATTGACTGGGGGTAAACCAGTGGGCAAAAAGGGATACTACATTGAGCCAACCATTTTTACCAATGTTAAGGAGGAGATGCTAATTGCACAGGAGGAAATATTTGGACCTGTGATGACACTTTCTAAGTTCAAAACCATTGAGGATGCAATTCAGAAAGGCAACAGCTCCAAATATGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGATATTGCCAACACTGTATCAAGGTCCATCCGTGCAGGCATCATTTGGATCAACTGCTTCTTTGCATTTGATATCGATTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGACTGGAAGCACTTCATAAGTATCTTAAAGTTAAATCTGTTGCAACTCCTATCTACAATTCTCCCTGGCTTTGA 1434 0.4331 MHLGLFGKTKGKTFETVDPRTEEVIVEIAEATKEDVDIAVKAAREAFDFGPWPRMPGAERAKIMLKWAQLIEQNVEEIAALDTIDGGKLFSWCKAVDVPEACNILRYYAGAADKIHGNVFKTSRDLHLYSLMEPVGVVGHIIPWNFPTVMFFAKVAPALAAGCSMVIKPAEQTPLSSLFYAHLAKLAGIPDGVLNVVPGFGSTAGAAISSHMDIDAVSFTGSTETGRKIMQAAALSNLKPVSLELGGKSPVLIFDDADIDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKRVVEKAKTWVVGDPFDPKVQQGPQTSKAQFDKILSYIDHGKSEGATLLTGGKPVGKKGYYIEPTIFTNVKEEMLIAQEEIFGPVMTLSKFKTIEDAIQKGNSSKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKYLKVKSVATPIYNSPWL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01529 477 FunFam Aldehyde dehydrogenase3 247 436 - -
Vian8g01529 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 465 IPR016162 GO:0016491
Vian8g01529 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 247 436 IPR016163 GO:0016620
Vian8g01529 477 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 9 468 - -
Vian8g01529 477 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 4 265 - -
Vian8g01529 477 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 243 250 IPR029510 GO:0016491
Vian8g01529 477 Pfam Aldehyde dehydrogenase family 9 467 IPR015590 GO:0016491
Vian8g01529 477 SUPERFAMILY ALDH-like 9 473 IPR016161 GO:0016491
Vian8g01529 477 FunFam Aldehyde dehydrogenase, putative 439 465 - -
Vian8g01529 477 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 271 282 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01529 Vian-Chr8 34822392 34825250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01529 11 477 Aldehyde Dehydrogenase Gene Family AT3G24503 68.803 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01529 K12355 - gmx:100784449 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04058 1 63622405 63626801 Vian8g01529 8 34822392 34825250 PCT