Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01528 ATGGCTGCTCTCTCTAATGGCAACCAAGCTTCTTCCTTCAAAATTCCTCCCATCAAGTTCACCAAACTCTTCATCAATGGACAATTTGTTGATTCCCTTTCAGGAAAAGAGTTTGAGACAATAGACCCAAGGACAGGGGAATTGATTACGAAGATCGCAGAGGGAGGAAAAGAAGACATTGACGTTGCTGTGAAAGCGGCACGTGTCGCTTTCGACCATGGTCCATGGCCTCGTATGCCCGGTGTGGAAAGAGCAAGAATTATGATGAAATGGGCAGACTTAATTGAGCAAAACATAGATGAACTAGCAGCATTGGAGGCCATCGATGCTGGGAAGTTGTACCACTTTTGTAAGGTTGCTGACATTCCTGCAGCAGCAGCTACCATACGTTATTATGCTGGTGCAGCAGATAAAATCCACGGGGAGGTCTTGAAAGCTTCTAGGGAGTTTCATGCATATACTTTACTAGAACCAATTGGTGTTGTGGGACACATTATTCCCTGGAACTTCCCTACCACCATGTTTTTTGCCAAGGTTAGTCCTTCCTTGGCTGCCGGTTGCACAATGATCCTCAAGCCTGCTGAACAAACACCTCTCACAGCCTTGTATTATGCTCATCTAGCTAAATTGGCTGGAATTCCAGATGGAGTACTTAATGTAGTACCTGGATTTGGTCCAACTGCAGGAGCTGCAATAAGCTCACACATGGACATTGATATGGTAAGCTTCACAGGTTCAACAGAAGTGGGGCGTGAAATAATGCGTGCTGCAGCTAGTAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCATCATAATTTTTGATGATGCTGATGTAAATAAAGCTGCTGAGCTTGCCCTCTTTGGCATCGTATTCAATAAGGGAGAAATCTGTGTTGCAGGTTCTCGCGTGCTCGTCCAAGAAGGAATTTATGATGAATTTGAGAAGAAATTGGTGGAGAAAGCAAAAGCCTGGGTGGTTGGTGATCCTTTTGATCCTAAAGCTCAACAAGGGCCTCAGGTTGACAAGAAGCAATTTGAAAAGATCCTTTCCTATATTGAGATTGGAAAGAAAGAAGGGGCCACCCTTTTGACAGGCGGCAAAAGAGTGGGAAACAAGGGTTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGAGGACATGCGTATAGTACAGGAGGAGATATTTGGTCCTGTGATGGCCTTGAGGAAGTTTAAGACTATTGAGGATGCAATTAAGATTGCCAACAGTACTAAGTATGGTCTAGCATCAGGCGTTGTGACCAAGAGTTTGGACACAGCCAACACTGTGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATCAATTGCTACTTTACCTTCGGGAATGACATTCCTTACGGAGGGTACAAAATGAGTGGATTTGGAAGAGATTTTGGACTGGAAGCCCTACACAAGTATCTACAAGTTAAATCTGTTGTAACTCCCATTTACAACTCTCCTTGGCTTTGA 1506 0.4389 MAALSNGNQASSFKIPPIKFTKLFINGQFVDSLSGKEFETIDPRTGELITKIAEGGKEDIDVAVKAARVAFDHGPWPRMPGVERARIMMKWADLIEQNIDELAALEAIDAGKLYHFCKVADIPAAAATIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPTTMFFAKVSPSLAAGCTMILKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDMVSFTGSTEVGREIMRAAASSNLKPVSLELGGKSPIIIFDDADVNKAAELALFGIVFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKAQQGPQVDKKQFEKILSYIEIGKKEGATLLTGGKRVGNKGYYIEPTIFSNVKEDMRIVQEEIFGPVMALRKFKTIEDAIKIANSTKYGLASGVVTKSLDTANTVSRSIRAGIVWINCYFTFGNDIPYGGYKMSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01528 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 288 - -
Vian8g01528 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Vian8g01528 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Vian8g01528 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Vian8g01528 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Vian8g01528 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
Vian8g01528 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Vian8g01528 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Vian8g01528 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Vian8g01528 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 9 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01528 Vian-Chr8 34799783 34804358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01528 4 501 Aldehyde Dehydrogenase Gene Family AT3G24503 69.661 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01528 K12355 - gmx:100791396 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04059 1 63629892 63632189 Vian8g01528 8 34799783 34804358 PCT