Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01522 ATGGGTACTCTTGGTAACACGGAAGTTTACAATCACGACCATGAAGATAATGATCCTGAAGAGTATCTTCATGGGGTGAATTTCTCGATCCAGAGAGGATTCAAGGCGAAACTGAAGGCGAGTTTGAAGGAAGCTTTGTTTCCTGATGATCCCTTCAGGCAGTTCAAGAACGAGGAGAAACGGACGAGGAGGGTGCTGAAGGGGGTGCAATACTTCATCCCTATCTTTGAGTGGCTACCGACGTATAATTGGCGTCTCTTTTGCTCTGACTTGATCGCAGGTTTAACCATATCAAGCCTTGCCATCCCTCAAGGCATTAGCTATGCCAAACTAGCAGACCTTCCTCCTCTCATTGGCCTTTATTCAAGCTTTGTCCCACCTCTGGTGTATGCTATTTTTGGGAGTTCAAGGCACATGGCTGTGGGGACGATAGCAGCAGCATCATTGCTTATTGGTCAAACCATACAAACTGTGGCAGACCCAAACGAGGATCCAACCTTGTATCTTCATTTAATTTTCACAACCACCTTTGTCACTGGTGTTTTCCAAGCTGCTTTGGGATTTTTCAGGCTGGGGATATTGGTGGACTTTTTCTCTCATTCCACCATCAATGGCTTCATGGGAGGGACAGCAGTGATTCTCATCCTCCAACAGCTAAAGGGCGTGTTTGGAATGATACATTTTTCACAGAAAACCAACTTGGTGGCGGTGGTAAAAAGCATCGTTAACAATAGACACGAGATTAGGTGGGAACCTACAGTTCTTGGAGTGGTCTTGCTTGCTTTCTTGCAATTTACCAAGCACTTGAGGAACAAGAAACCAAAACTCTTTTGGGTACAGGCTATAGGTCCAATGGTGACTGTAGTGGTAGCTGGTGTTTTCACCTACCTCGTCAAGGGCCAAAAACATGGAATTCAAATTGTGGGACATTTAGACAAAGGATTAAATCCATTGTCCATCCACTATTTGAACTTTAATGGTAAATACTTATCAGCAGTTCTGCAAGCTGGAATTATCACAGGGGTGTTATCATTAGCAGAAGGAATAGCAATAGGAAGAAGCTTTGCTGTTACTGATAACACACCTCATGATGGGAACAAAGAAATGATCGCTTTTGGCCTCATGAACTTGTTCGGATCTTTTACTTCATGCTACTTGACTAGTGGACCATTTTCGAAGACTGCAGTGAATTACAATGCAGGGTGTAAGACTGCAATGGCAAATGTGATACAGGCAGTAATAATGGCACTGACACTGCAATTTTTGGCACCATTATTTGGCTACACCCCTCTTGTTGCTCTCTCAGTCATTATCATATCTGCCATGCTTGGACTCATTCATTACGAAGAAGTCGTTCATCTCTTCAAAGTTGACAAATTTGATTTTGTCATTTGCATGGCTGCTTTCCTCGGAGTTATCCTCATAAGCATGGACGTCGGTCTCATGATTTCTGTTGGACTAGGGGTTTTGAGAGCACTGTTATATGTGGCTAGACCAGCGCCATGCAAGCTTGGAAAGTTAGCAGAAGTTGGTTTATACAGAGACACAGAGCAATATAAAGTTTCAACATTTGCTGGGGTTCTTATTATTCAACTTGGTTCTCCCGTTTACTTTGCAAATTCTAATTACGTCAAAGAAAGGATTATGAGGTATATTCGAAGCGAACAAGCTTCTACCGGAGAGAATGTTGAACACATCGTACTTGATTTGTCAGGAGTAACATCCATTGACACAACTGCTATCAAAGCATTGGATGAGATGGTTAAAGTGTTGACAAAGAATGCAATTAAGATTTTGTTCGTAAATCCGAGGGTGGAGGTGTTGGAGAAGCTAATGTTATCAAAGTTTGTTGACAAAATTGGGAAGGAAGCGTTCTATCTAACATTGGATGAGGCAGTGATGGCAAGTCAATATTCACTTCGTTCATCAAAGGAAAATCATGGCGAAGGTGGCATGGTTTAA 1962 0.4246 MGTLGNTEVYNHDHEDNDPEEYLHGVNFSIQRGFKAKLKASLKEALFPDDPFRQFKNEEKRTRRVLKGVQYFIPIFEWLPTYNWRLFCSDLIAGLTISSLAIPQGISYAKLADLPPLIGLYSSFVPPLVYAIFGSSRHMAVGTIAAASLLIGQTIQTVADPNEDPTLYLHLIFTTTFVTGVFQAALGFFRLGILVDFFSHSTINGFMGGTAVILILQQLKGVFGMIHFSQKTNLVAVVKSIVNNRHEIRWEPTVLGVVLLAFLQFTKHLRNKKPKLFWVQAIGPMVTVVVAGVFTYLVKGQKHGIQIVGHLDKGLNPLSIHYLNFNGKYLSAVLQAGIITGVLSLAEGIAIGRSFAVTDNTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVIQAVIMALTLQFLAPLFGYTPLVALSVIIISAMLGLIHYEEVVHLFKVDKFDFVICMAAFLGVILISMDVGLMISVGLGVLRALLYVARPAPCKLGKLAEVGLYRDTEQYKVSTFAGVLIIQLGSPVYFANSNYVKERIMRYIRSEQASTGENVEHIVLDLSGVTSIDTTAIKALDEMVKVLTKNAIKILFVNPRVEVLEKLMLSKFVDKIGKEAFYLTLDEAVMASQYSLRSSKENHGEGGMV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01522 653 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Vian8g01522 653 SUPERFAMILY SpoIIaa-like 518 633 IPR036513 -
Vian8g01522 653 Gene3D STAS domain 499 639 IPR036513 -
Vian8g01522 653 Pfam Sulfate permease family 87 468 IPR011547 GO:0016020
Vian8g01522 653 PANTHER SULFATE TRANSPORTER 37 638 IPR001902 GO:0016020|GO:0055085
Vian8g01522 653 NCBIfam sulfate permease 74 632 IPR001902 GO:0016020|GO:0055085
Vian8g01522 653 ProSiteProfiles STAS domain profile. 517 636 IPR002645 -
Vian8g01522 653 CDD STAS_SulP_like_sulfate_transporter 526 629 - -
Vian8g01522 653 Pfam STAS domain 523 632 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01522 Vian-Chr8 34734734 34739327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01522 24 644 Inorganic Solute Cotransporters AT5G19600 61.254 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01522 K17471 - gmx:100789107 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01522 8 34734734 34739327 Vian8g01522 8 34734734 34739327 ECH