Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01521 ATGAGGAAGAAAACCTATTCCTTCCACTTCTCACTCTCACTCTCTCTTTCTCTCTTCGTCGTTGTGCTTTTGCAGTCACTCTGTGCCTCTGAAGGAATCTCCCACAATGGGCCTCTCACCGACGCGGAAGCCACCTACATCAAGCAGCGCCAGCTTCTGTACTACAAGGACGAGTTCGGTGACAGAGGAGAAAAAGTAACCGTAGATCCCTCTTTCCGCTTCGAGAACGACCGTTTGAGAAACGCTTACATAGCGTTACAGGCATGGAAGCAGGCCATTCTCTCTGATCCCAAAAACCTCACGCTAAACTGGGTGGGGCCCGATGTCTGCAACTACACCTACGTCTTCTGCGCTCAGGCACTTGACAACCCTAAGATCCGCACCGTCGCCGGAATCGACCTCAACCACGGCGACATTGCCGGATATCTCCCCGAGGAGCTCGGCTTGCTCACTGACCTTGCGCTTCTCCATATCAACACCAACCGCTTCTGCGGCACCGTGCCGCACAAGTTCGACAAGCTCAAACTCCTCTTCGAGCTGGATCTCAGCAACAACCGATTCGCTGGAAAGTTCCCCGACGTGGTGCTGCGTCTGCCGCAGCTCAAGTTCCTAGATCTGAGGTTCAACGAATTCGAAGGCACGGTCCCCAAGGAGCTCTTCGACAAGGACCTCGACGCCATTTTCATCAACGACAACCGCTTCGTGTTCGACCTGCCGGATAACTTTGGCAACTCGCCGGTGTCCGTGATCGTGCTGGCCAACAATCGCTTCCATGGCTGCGTGCCGGCTGGAATCGGCAACATGAAGGGGTTGAACGAGATTATTCTGATGAACAACGCTTTCAGGTCGTGCTTCCCCGAGGAGATAGGGTTGCTGAAGAACTTGACGGTGTTCGATGTGAGCTTCAACCAGTTGTTAGGTCCTTTGCCTGACGCCATCGGAGGTGCCGTGAGTTTGGAGCAGCTCAATGTGGCTCATAATTTACTCTCTGGGAAGATTCCCGAGAGCATTTGCAAGCTTCCCAATCTCCAGAACTTTACTTTCTCTTACAACTTCTTCACCGGCGAGCCGCCCCGGTGTCTCGCTTTGCCGGCGGCTGACGACCGCCGCAACTGCCTACCGGCCAGGCCCTTCCAGCGCTCCGCAGGACAATGCAAGTCGTTTTTGTCACACCCTGTCGATTGCAAGTCTTTTAGGTGTAAGCCTTTTGTTCCTACCTTGCCTCCTCCTCCTCCACCATCACCACCATTGCCGTCACCGCCACCGTCGCCTGTTTATGTCCCCCGTTCCCCTCCGCCTCCACCACCGGTGTACTCGCCACCACCACCACCTCCAGTGTATTCGCCTCCTCCACCACCTCCAGTGTATTCGCCTCCACCGCCGCCGCCACCTTCACCACCTCCGCCTTCACCGCCCCCGCCAGTCTATTCTCCACCTCCACCCCCACCTTCACCGCCACCACCATCACCACCTCCGCCATCCCCTCCACCGCCAGTCTATTCGCCACCTCCTCCTCCCCCATCCCCGCCACCACCAGTCTATTCGCCACCTCCTCCTCCACCTTCACCGCCGCCACCTTCCCCGCCACCGCCCTCACCGGTTTATTGTGTAAGGTCTCCGCCACCACCTTCACCACCTCCGCCATCACCTCCACCTCCACCAAGTCCTGTATTCTCCCCACCACCACCTGTTCAATACTACTACAGTCCACCACCGCCACCACAACACTCGCCTCCCCCGCCCCCACCACACTCACCACCGCCACCACATTCACCGCCGCCTCCAGTTTATCCCTATCTATCACCGCCCCCACCTCCTCCTGTTCACTCTCCACCTCCACCGGTCCATTCACCACCACCACCATCTCCTCCACCATGTATAGAACCGCCACCACCACCTCCCCCCTGTATAGAACCGCCTCCACCTCCGCCATCACCACCGCCTTGTGAAGAGCATTCACCACCACCACCACCATCACCACATCCTGCACCTTACCTGCCACCGCCATCGCCATCACCACCACCTCCTCCAGTTCAATACAGTTCTCCTCCACCACCATCGTCGCCACCTGTTTATTATTACAACTCACCGCCGCCCCCACCTCCTTCGTCTCCACCACCAGCCCCTGTATATGAAGGGCCTTTGCCACCCGTCATAGGAGTCTCATATGCATCTCCTCCTCCACCTCCCTTTTATTGA 2199 0.573 MRKKTYSFHFSLSLSLSLFVVVLLQSLCASEGISHNGPLTDAEATYIKQRQLLYYKDEFGDRGEKVTVDPSFRFENDRLRNAYIALQAWKQAILSDPKNLTLNWVGPDVCNYTYVFCAQALDNPKIRTVAGIDLNHGDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDKLKLLFELDLSNNRFAGKFPDVVLRLPQLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCVPAGIGNMKGLNEIILMNNAFRSCFPEEIGLLKNLTVFDVSFNQLLGPLPDAIGGAVSLEQLNVAHNLLSGKIPESICKLPNLQNFTFSYNFFTGEPPRCLALPAADDRRNCLPARPFQRSAGQCKSFLSHPVDCKSFRCKPFVPTLPPPPPPSPPLPSPPPSPVYVPRSPPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPVYCVRSPPPPSPPPPSPPPPPSPVFSPPPPVQYYYSPPPPPQHSPPPPPPHSPPPPHSPPPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPPSPHPAPYLPPPSPSPPPPPVQYSSPPPPSSPPVYYYNSPPPPPPSSPPPAPVYEGPLPPVIGVSYASPPPPPFY 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01521 732 FunFam Leucine-rich repeat extensin-like protein 5 245 384 - -
Vian8g01521 732 PRINTS Proline rich extensin signature 450 467 - -
Vian8g01521 732 PRINTS Proline rich extensin signature 404 425 - -
Vian8g01521 732 PRINTS Proline rich extensin signature 429 445 - -
Vian8g01521 732 MobiDBLite consensus disorder prediction 606 625 - -
Vian8g01521 732 FunFam Leucine-rich repeat extensin-like protein 1 83 244 - -
Vian8g01521 732 MobiDBLite consensus disorder prediction 449 601 - -
Vian8g01521 732 MobiDBLite consensus disorder prediction 637 732 - -
Vian8g01521 732 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 529 - -
Vian8g01521 732 Gene3D Ribonuclease Inhibitor 82 370 IPR032675 -
Vian8g01521 732 SUPERFAMILY L domain-like 84 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01521 Vian-Chr8 34711276 34713474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01521 1 400 Trihelix Transcription Factor Family AT4G18670 70.823 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01521 - - gmx:106799218 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01521 8 34711276 34713474 Vian8g01521 8 34711276 34713474 ECH