Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01489 ATGCCGGACGTTCAGACCCTTGTCAATGATTTTGTGAACAAGCTTAAGAAACGTGATGCTAGTAAAATTGAAGGTTCACAGGCCACAGCAAAGCTCACAGCAGAGTTGCTCCGGTCTGTGATATCACAGCAGCGGGTGCCACACACAAACCAGGCCACAGCTCTGATTCATGCAGTAAGGGCTATTGGGGAGCAGCTTATTGCTGCCAATCCTGTTGAGCTAGCCGTGGGAAATATTGTGAGGCGTGTTCTGCACATTATAAGGGAAGAGGATCTTTCCCTTGCAACAGCTGCTATGGCTGGTTTGGGGGTATCAGCTGCAAGTGACGATGAAGATGATGAGGAGCGAGACGAAAACCCTGTTTTATCTGCTGCTGCTGTAGCAGCTGCTGCTAGAAGTACATTACGTCCGCCGTCATTACAAACTCTTCTAGAGGATACGTCTGATTCAGTTGCCGCTCCCCACACATCTTCCTCTGGGGGTGAATCTGACGGGAGAAGTAGATCTATTGAGAAAGGTTCAAGAGTTAGGAAGTTGAAACATGATGTCATTGAAGCAGTTAATGAACTAATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAGCAGGCAGTGGAGCACATTCACCACAATGAGGTAATTTTAACGTTAGGCAGCTCAAAAACAGTTTTGGAATTTCTTTATACTGCGAAGGAAAAGCAAAGATCATTTAAGGTCTTTGTTGCTGAAGGTGCCCCAAGATACCAAGGACATATCCTTGCAAAAGAATTGGCTGCCAGAGGCTTACAGACCACAGTAATCTCTGATTCTGCCGTTTTTGCATTGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTTGTACTTGCTGGGAGTCACAAGTTGTGTCCTTTGTATCCACACAATCCTGAAGTCCTTCTTAATGAACTGAGATCCCCGTCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCAAGCGGTGCTGGTTCTCTTCATGTTGTCAATCCAACCTTTGATTATGTGCCGCCAAAATTTGTTAGTCTATTTATTACTGACACGGGAGGGCACAACCCGTCATATATGTACCGGCTCATAGCTGATTACTATTCAGCTGATGATTTGGTGGTGAAACGAAGACCTATTACAGGGAGTTGA 1257 0.4511 MPDVQTLVNDFVNKLKKRDASKIEGSQATAKLTAELLRSVISQQRVPHTNQATALIHAVRAIGEQLIAANPVELAVGNIVRRVLHIIREEDLSLATAAMAGLGVSAASDDEDDEERDENPVLSAAAVAAAARSTLRPPSLQTLLEDTSDSVAAPHTSSSGGESDGRSRSIEKGSRVRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHHNEVILTLGSSKTVLEFLYTAKEKQRSFKVFVAEGAPRYQGHILAKELAARGLQTTVISDSAVFALISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHVVNPTFDYVPPKFVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPITGS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01489 418 Gene3D - 197 402 IPR042529 -
Vian8g01489 418 FunFam translation initiation factor eIF-2B subunit beta 197 403 - -
Vian8g01489 418 MobiDBLite consensus disorder prediction 145 173 - -
Vian8g01489 418 Pfam Initiation factor 2 subunit family 22 392 IPR000649 GO:0044237
Vian8g01489 418 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 409 - -
Vian8g01489 418 MobiDBLite consensus disorder prediction 145 164 - -
Vian8g01489 418 SUPERFAMILY NagB/RpiA/CoA transferase-like 20 407 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01489 Vian-Chr8 34331163 34336592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01489 1 410 Eukaryotic Initiation Factors Gene Family AT3G07300 79.369 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01489 K03754 - gmx:100778545 749.969