Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01488 ATGGTAAAAGCGAGGGACAGAACCGAGGATTTCAAAGATACCGTGCGCCGCACCGCTCACTCTTTGGGCTACGACGAGGCTAAAGTAGCGTCTATTATGGCATCTTTCATCATCCATAAACCGCCACAAAGGTCTCCGTTTTCCAAAGCCGCATTGAAGACGCTGGAGAGTATTGGAGAGCTGGATCAGTTTTTGTTGAAGCATAGAAAGGACTATACGGATCTGCATCGCACCACAGAAAAGGAAAGAGATAGCATCGAGCATGAAGTTAGTACTTTTATTAAAACATGCCAGGAACAAATTGATATTCTTAAGAATAGTATAAATCAAGAAGAGGAAACTTCCAAAGGTTGGCTTGGCATTGCGACTACAAAATCTAATGCCGACGTGATTGCCCACAAACATGGGGTGGTTCTAATTTTAAGTGAGAGACTCCATACAGTCACTGCACAGTTTGATCAGCTAAGAGCTGTACGCTTCCAGGATGCTATTAATAAAGCAATACCACGGAGAAAACTTAACCGTGTAACCAGAAAAGATTCTGCAGAAACCTCAAAACCAGATGGCATGGACCTCAGAGAACCTGAAGAGTTACGTGCTGAGCCTCTACGAGTTCAGCAACAACTCTTGGACGATGAAACACGTGCCCTGCAGGTGGAATTGACTAATCTTCTCGATACAGTTCAAGAAACCGAAACTAAGATGGTGGAAATGTCTGCACTAAATCACCTCATGTCTACTCATGTTTTGCAGCAAGCTCAGCAAATTGAGCATCTTTATGAGCAGGCTATTGAAGCCACTAAGAATGTTGAGCTCGGTAACAAAGAACTCTCACAAGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTACTGTTTCTATTTGTGCTTACTTTTTCAATCCTCTTTCTTGATTGGTATAGTTAA 930 0.428 MVKARDRTEDFKDTVRRTAHSLGYDEAKVASIMASFIIHKPPQRSPFSKAALKTLESIGELDQFLLKHRKDYTDLHRTTEKERDSIEHEVSTFIKTCQEQIDILKNSINQEEETSKGWLGIATTKSNADVIAHKHGVVLILSERLHTVTAQFDQLRAVRFQDAINKAIPRRKLNRVTRKDSAETSKPDGMDLREPEELRAEPLRVQQQLLDDETRALQVELTNLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAIEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01488 309 FunFam Syntaxin-81 like 212 306 - -
Vian8g01488 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020|GO:0016192
Vian8g01488 309 Coils Coil 94 114 - -
Vian8g01488 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Vian8g01488 309 Gene3D - 212 306 - -
Vian8g01488 309 PANTHER SYNTAXIN-18 1 309 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01488 65 309 SNARE and Associated Proteins AT1G51740 72.358 2.33e-111 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01488 K08492 - gmx:100801587 547.354