Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01483 ATGCGGTTCAGCTGCAATGGTTGCCGCGTCCTCCGCCGTGGCTGCACGGCGGACTGCCCCATTCGAAGGTCCCTCGAATGGATAAGTTGCCCTCACTCTCAGTCCAACGCCACCCTCTTTCTCGCTAAGTTCTATGGCCGTCAAGGCCTCCTCAACCTCCTCATCAACGCTCCCTCCCATCTCCAACCAGCGGTATTCAAATCTTTGCTTTACGAAGCTTGCGGTAGGATGGTGAACCCGATTTTCGGCTCGACCGGGTTACTCTCGACCGGAAATTGGCACCTCTGTGAAGCTGCTGCCAAAGCCGTTCTCAGTGGCGCGCCGATTCAACAGGCTCTTCTTGATGGAGTGGAGAGCCTCGATTTCAAGGCTTGCGATATTCGCCACGTGGCAAAGAGTCATAAATCGTACAGCCCTGGTGCACTCAAAGTAGTAAAGTCACGGGCCAGCAAGTTCAAGCGCCGCGCTGCGAAGCCAAAAGTGGACTCAACCGTGGCTGAGTTGGCTGGAAGCAAGTTATTTGGACAGGGTTCTCTGAGTCAGGACTCGGAGTCTGGGTTGACTCGGACGAGTGAGAACAAAATCATTGGTGGGGAAGCCGATAGTAGCAGCAGCGAGAATGTCATGGTGGCGGCTCGAGCCAATGATGAAGAAATTGAGCTTCGGTTGACTTTGGGGTGGAGACCATTGAAAAAATCAATAACTGCTGTATTGCCACGTGTAGGGCTCGATCTTTCTGGCTAG 744 0.5376 MRFSCNGCRVLRRGCTADCPIRRSLEWISCPHSQSNATLFLAKFYGRQGLLNLLINAPSHLQPAVFKSLLYEACGRMVNPIFGSTGLLSTGNWHLCEAAAKAVLSGAPIQQALLDGVESLDFKACDIRHVAKSHKSYSPGALKVVKSRASKFKRRAAKPKVDSTVAELAGSKLFGQGSLSQDSESGLTRTSENKIIGGEADSSSSENVMVAARANDEEIELRLTLGWRPLKKSITAVLPRVGLDLSG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01483 247 MobiDBLite consensus disorder prediction 177 202 - -
Vian8g01483 247 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Vian8g01483 247 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Vian8g01483 247 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 4 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01483 Vian-Chr8 34296124 34297097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01483 1 237 AS2 family AT3G02550 42.742 1.74e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vian8g01483 LOB 5.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01483 - - vun:114181255 415.231