Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01482 ATGAATCCACCATCAAATAACCACAATATAGAACCAAGAGACCTGGGAAATTCAGGTTCAAATATCAATAATGGAGTTAACTCACCCCAGAGGAAGGTTTTGTCAGGAACAAAGCTGCAACGTGTTTTACACAGTCCACTTATGGCAGAGCCATCACCAACGTTAATAAACCAAGTAGGTTCTAACAAGTTTCCCGAGGTGTTTCGAGTAAAACAAGGAAGCTATGCTGATCATCCTTCAGCCAAAATTTCAGAACTGATGAAATCAACTAGCTTGGATAATGCTCCTACTCAGTCGCTTTTGAGTGTGGTGAATGGTATTTTGGAAGAAAGTGTTGAAAGAAGAAATGGCGAAATACCCCAACAAAACAATATTTTTAAGGCCCGTGAAGAAAAATATCACTCAAGAATCAGAGTCCTTGAAGCTCTTGCATCTGGAACTGAGGAAGAAAGAGAGACTGAGAGGATTGAAAAAGAAGAAAAGAAGGTAGATGAATTAAAACAAACTAGGATGACTAAAATGCAAGAAGAAAAGGAAAATGATGTGAACCTAATTGAGAACACTAAAAGGGAAGAAAAGAGGGAATGCGACAAAGAGGTTATGAGATATATTAAAGAGTTGAAGGATAAAACTAAGGAAATTTCAACATTGAAACAAAAGCTAGAAACGATGAAAAAAACATACGAAGTACAATGTTCACAGATGGAACAAAAAACTAAGGAGGAAAATAGAGCAGATGGCAAAGAGATTAATAGATATATTAACGAGTTAGAGGACAAAACTATGGAAATTTCAGCATTAAATCAGAAACTAGAAACAATGAAAAAAACGTGTGAAGAGCAACGCTTAGAATTAGAAGCAAAAGCCGAGGAGGGAAAGATGACAGATGTAATGAAAATGTTAGAGGACAAAAACATTGAAATTTCAACGTTGAGGAAAAATCTAGAAACACTAGAAACAATATCAAAAACATATGAAGTACAGTGTTCACAGTTGAAAGCAAAAGTTGAGGAGAAGAACATGACAGATGGAACAGATTCTATCAGATATGTTAAAGAATTAGAGGACAAAAACATGGAAATTTCAACGTTGAAGCAAAAACTAGACAAAGTAGAAACGATGGCAAAAACATATGAAGTAGAGTGTTCACAGTTGAAAGAAAAAGTTGAGGAGAAGAACGTGACAGATGGAAAAGATTCTATCAGATATATTAAAGAATTGGAGGACAAAAATATGGAAATTTCAATACTAATCAAAAAGCTAGAGACAATGAAAAAAGAATATGAAGTACAATGCTCACGGTTGGAAGCAAAAGCTGAGGAGGAAAAGAGCGAAGAGGGTAAAGAGGTTAGTAGATATATTAAAGAGCTAGAGGACAAAGATATGGAAATTTCAACACTGAGGCAAAGACTAGAAACAGTGACAAAAACATACGAAGTACAATGCTCACAACTGAAAGCAAAAACTGAGGAGGAAAAGATGGAAAATGGAAAAGAGGCTATCAGTTATATTAAAGAGTTGGAGGAAAAAAATAAGGAAATTTCTGCATATAGGCAAGAATTGGAAACAATGAAAAAAACATATGAAGTTCAATGCTCACAGATGAAAGCAAAAACTGAAGAGGAAAAAATAGCAAATGGGAATGAGACTATTAGATATATCAAAGAGCTAGAGGAAAAAAATATGGAAATTTCAGCATTTAAACAGGAGCTAGAAACAATGAAAAAAACACATGAAGTTCAGTGCTCACAACTGAAAGCAAACGCTGAAGAGGAAAAAATGGCGAATGGGAGAGAAATTATTAAATATACCAAAGAGCTAGAGGACAAAAACATGGAAATTTTAGCATTTAAGCAAGAACTAGAAACAACGAAAGAAGCATATGAAGCACAATGCTCAGAACTGAAAGCAAAAGCTCAAGATGAAAAAATGGCGAATGAGAAAGAAATTATGAAATATATGAAAGAGGTAGAGGACAAAAGTATGGAAATTTCATCATTTAAGCAAGAACTAGAAACAACGAAAAGAACACACGAAGTACGATGCTCAGAATGGGAAGCAAAAGCGGAGGCTGGTAGAGAAGAGCTGAAAGAGAAATCACAAGAATACGAAAATTTGTTGGAAAAACTAAGAAATAAGGTTAAAGAGAATGAAACCCTTTACGAGTCAAAATATCAGAAGTGGATGCAGAAAGAGAACCAGATACGAAAAGATGTGAATATTCAGTTCAGTTCCATAAAGACATTGAAATTATCATGGGAATCTATTAAGCAAGATGCTTTGAAAGAGCAAATTATTTACTCTGAGGAATGTAAAAAGTTAGGTTTAAATCTGAAACCACTAGTAGATGCAGCTGAGAATTATCAAATAGTTCTTGCAGAAAACCGAAAACTGTTCAATGAAGTTCAAGAATTAAAAGGAAATATAAGAGTATATTGTCGACTTAGACCATTTCTTCCTGGTCAAAAGGAAAAACAATCTATTGTGGAACACATTGGTGAAACTGAGTTGGTTGTGGCAAATCCTTCCAAACCAGGAAAGGAAGGCCTTAGAACATTTAAGTTCAATAAGGTCTTTGGTCCAACCTCAACTCAAGCTGGGGTGTATGCTGACATACAAGCCTTCATACGATCAGTATTGGATGGGTATAACGTATGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACTTTCACAATGAGTGGTCCAAATAATGCAACACCCGAGACTGTTGGTGTTAACTATCGAGCTCTTAATGATCTCTTCAGCATATCTACAAGTAGAAAAAGCTCAATAGAGTATGAGATTGGTGTTCAACATGTGATGTCTCTGAACGATGATTTCCTTGATTTACACACACTTGGGATACTGAGTAATGCTCAACCAAATGGATTAGCAGTGCCTGATGCTACCATGCAACCTGTGAAATCACCTGAAGATGTCATAAAGCTAATGGACATTGGTCTGAAAAATAGAGCTAAGGGTTCGACAGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTTGTCTCAATTCATGTTCGTGGGATGGATAAAAAGGCTGGTTCCTCTCTTCATGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTTGATCGCTCTGAAGTAACTGGGGATAGACTCAAGGAAGCACAACATATCAACAAATCACTATCTGCTCTTGGAGATGTCATTTTTGCACTTTCTCAGAAGACTGCTCATGTGCCATATAGAAATAGCAAGCTCACTCAACTTCTGCAAACATCTCTTGGTGGTCAAGCAAAAACACTCATGTTGGTCCAAATTAATTCTGATGTAAAGTCTTTTTCTGAATCTTTGAGTACTTTAAAGTTTGCTGAGAGGGTTTCCGGAGTTGAGTTAGGAGCTGCTAAAAGTAGCAAAGAAGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTTTGAAGGACACTATTTCGGTTAAAGATGAGGAGATTGAGAAGTTACAATTACTTAAGGATCTAAAAAATGTATATCCTGGTGCTAATTCTGAGAACGTTGAAACTGCCTAA 3564 0.36 MNPPSNNHNIEPRDLGNSGSNINNGVNSPQRKVLSGTKLQRVLHSPLMAEPSPTLINQVGSNKFPEVFRVKQGSYADHPSAKISELMKSTSLDNAPTQSLLSVVNGILEESVERRNGEIPQQNNIFKAREEKYHSRIRVLEALASGTEEERETERIEKEEKKVDELKQTRMTKMQEEKENDVNLIENTKREEKRECDKEVMRYIKELKDKTKEISTLKQKLETMKKTYEVQCSQMEQKTKEENRADGKEINRYINELEDKTMEISALNQKLETMKKTCEEQRLELEAKAEEGKMTDVMKMLEDKNIEISTLRKNLETLETISKTYEVQCSQLKAKVEEKNMTDGTDSIRYVKELEDKNMEISTLKQKLDKVETMAKTYEVECSQLKEKVEEKNVTDGKDSIRYIKELEDKNMEISILIKKLETMKKEYEVQCSRLEAKAEEEKSEEGKEVSRYIKELEDKDMEISTLRQRLETVTKTYEVQCSQLKAKTEEEKMENGKEAISYIKELEEKNKEISAYRQELETMKKTYEVQCSQMKAKTEEEKIANGNETIRYIKELEEKNMEISAFKQELETMKKTHEVQCSQLKANAEEEKMANGREIIKYTKELEDKNMEILAFKQELETTKEAYEAQCSELKAKAQDEKMANEKEIMKYMKEVEDKSMEISSFKQELETTKRTHEVRCSEWEAKAEAGREELKEKSQEYENLLEKLRNKVKENETLYESKYQKWMQKENQIRKDVNIQFSSIKTLKLSWESIKQDALKEQIIYSEECKKLGLNLKPLVDAAENYQIVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHIGETELVVANPSKPGKEGLRTFKFNKVFGPTSTQAGVYADIQAFIRSVLDGYNVCIFAYGQTGSGKTFTMSGPNNATPETVGVNYRALNDLFSISTSRKSSIEYEIGVQHVMSLNDDFLDLHTLGILSNAQPNGLAVPDATMQPVKSPEDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGMDKKAGSSLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKTAHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGVELGAAKSSKEGRDVRELMEQVASLKDTISVKDEEIEKLQLLKDLKNVYPGANSENVETA 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01482 1187 Coils Coil 607 656 - -
Vian8g01482 1187 PRINTS Kinesin heavy chain signature 998 1015 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01482 1187 PRINTS Kinesin heavy chain signature 1078 1099 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01482 1187 PRINTS Kinesin heavy chain signature 1029 1047 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01482 1187 PRINTS Kinesin heavy chain signature 882 903 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01482 1187 Gene3D - 596 636 - -
Vian8g01482 1187 Gene3D - 495 537 - -
Vian8g01482 1187 Gene3D - 344 387 - -
Vian8g01482 1187 Gene3D - 444 487 - -
Vian8g01482 1187 Gene3D - 645 686 - -
Vian8g01482 1187 Gene3D - 195 236 - -
Vian8g01482 1187 Gene3D - 395 436 - -
Vian8g01482 1187 Gene3D - 546 587 - -
Vian8g01482 1187 Gene3D - 294 334 - -
Vian8g01482 1187 Gene3D - 246 284 - -
Vian8g01482 1187 Coils Coil 500 538 - -
Vian8g01482 1187 PANTHER KINESIN-LIKE PROTEIN KLP-3 656 1165 IPR027640 GO:0003777|GO:0007018
Vian8g01482 1187 SMART kinesin_4 806 1136 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01482 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 808 1166 IPR027417 -
Vian8g01482 1187 Coils Coil 450 470 - -
Vian8g01482 1187 Pfam Kinesin motor domain 814 1126 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01482 1187 Coils Coil 404 445 - -
Vian8g01482 1187 MobiDBLite consensus disorder prediction 1 34 - -
Vian8g01482 1187 Gene3D Kinesin motor domain 750 1130 IPR036961 -
Vian8g01482 1187 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 750 1130 - -
Vian8g01482 1187 Coils Coil 200 238 - -
Vian8g01482 1187 Coils Coil 1142 1162 - -
Vian8g01482 1187 Coils Coil 668 727 - -
Vian8g01482 1187 ProSiteProfiles Kinesin motor domain profile. 808 1128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01482 1187 Coils Coil 149 195 - -
Vian8g01482 1187 Coils Coil 250 291 - -
Vian8g01482 1187 Coils Coil 301 321 - -
Vian8g01482 1187 Coils Coil 354 395 - -
Vian8g01482 1187 Coils Coil 554 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01482 Vian-Chr8 34284186 34290022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01482 796 1162 Calmodulin-binding Proteins AT5G65930 38.259 9.81e-62 229