Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01454 ATGTTCCGCAGATTCACTCTCTTCCTTCTGTTCTCTGCAACTGCAGCAACGCTTCTTCTTCCAACTACATGTGATGTGAACTTCAGCACTTCGTCTATGCTTCTGGGTCAAAACCACTCAAAAATCGTAAACAAAGTCGGTGATCTTTTCATGGCATGTGTCGGTAGAAAAAATTGCAGCAGACCCCACAGGAGTCTGGCAGAAACTAGTGTTATTAACCGGAGTGTTGCTACTCACCAGAATTGCAACGGTAGTCGAGCTTGTATTATCAACGCAACATCGCAGGGTTTCATATCGCCCGTGTCGACACCAGATTTAAAGTCACCGCCACCACGGTCACCGCTGCAATCATCACCACCATATACACGACGATCACGATCAATTTCTTTACCACCAGGATCGGCACCAGCACCAGCGCCTGAATTAATGTTTTTTGGAGGAAGTGGAAATTTTGGTGATTCAGATGGCACATATAGCTCACATGACGACCAGGTCAATTGGATAATTATAATTATAATTATAATTATTGTAGGTGTTGTAAGTGTTGTAGTTGGAGGATGTGTCTTCATATTTTGTTGTTTTAGACGCAAGTCTTCAACCCGACTGGTCAAATTTAGTGTTGTAATTGGAGGATGTGTCTCCATATTTCGTTGTTTTAGACAGTATTCAACCCGACTGGTCAAATTTAGTGTTGTAATTGGAGTGTGTGTCTCCATATTTCGTTGTTTTAGACAGTATTCAATCCGACTGGTCAAATTTCGTTTTACCAGAAACAATGATTCAAATATTGAAGCATTCTTAAGAAATCAAGGAGCCATAGCACAGAAAAGATACAAATTTTCAGAAGTGAAGAAAATGACCAATTCATTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTACAGTATACGAAGGAAAACTACAAACGGGTAGCCCTGTGGCCGTAAAGTTACTGAAAGCATCCAAAAGAAATGGTGAAGAGTTCATCAATGAGGTTGCCAGCATCAGTAGAACATCTCATGTTAATATTGTCACACTTGTTGGATTTTGTTTGGAAGGCTCCAAAAAGGCTCTCATCTATGAGTTTATGGCTAATGGTTCTTTGGATAAGTTCATCTACAACAGAGGGCCAGAAAATATTGTATCTTTGACCTGGGAGAATTTATATCAAATTGCCATTGGAATAGCTAGAGGGTTGGAGTACTTGCACAGAGGCTGCAACACTAAAATTTTACATTTTGATATAAAGCCACATAATATTCTTTTGGACGAGAATTTTTGTCCTAAAATATCAGATTTTGGACTAGCAAAGCTCTGTCCCAGGAATGAAAGCATTATTTCTATGTCTGATAAAAGAGGAACAATGGGGTATTATGCTCCTGAAATGGTCAATAGACATTTTGGTGGGGTTTCACAAAAGTCTGATGTGTACAGTTATGGAATGATGCTACTGGAAATGGTAGGAGGAAGGAAGAACATTAATCCTGAAGCTAGTCATACGAGTGAGATATACTTCCCCCATTTTGCATACAGAAGACTTGATGTGGATATTGATGTTGATAATGATGTGAGACCATATGAAGTGATGAATGCAGAAGAAGGTGAGATTGCAAAGAGAATGACTGTAGTTGGCTTATGGTGCATTCAATCACTTCCAAGTGATAGACCTACAATGAGCAGAGTGGTAGAAATGTTGGAAGGTAACATGAATTCTTTGGAAATGCCTCCAAAGCCTTTGTTTTCTTCTCCTTCTAGATCAGAAACATAA 1767 0.3939 MFRRFTLFLLFSATAATLLLPTTCDVNFSTSSMLLGQNHSKIVNKVGDLFMACVGRKNCSRPHRSLAETSVINRSVATHQNCNGSRACIINATSQGFISPVSTPDLKSPPPRSPLQSSPPYTRRSRSISLPPGSAPAPAPELMFFGGSGNFGDSDGTYSSHDDQVNWIIIIIIIIIVGVVSVVVGGCVFIFCCFRRKSSTRLVKFSVVIGGCVSIFRCFRQYSTRLVKFSVVIGVCVSIFRCFRQYSIRLVKFRFTRNNDSNIEAFLRNQGAIAQKRYKFSEVKKMTNSFKVKLGQGGFGTVYEGKLQTGSPVAVKLLKASKRNGEEFINEVASISRTSHVNIVTLVGFCLEGSKKALIYEFMANGSLDKFIYNRGPENIVSLTWENLYQIAIGIARGLEYLHRGCNTKILHFDIKPHNILLDENFCPKISDFGLAKLCPRNESIISMSDKRGTMGYYAPEMVNRHFGGVSQKSDVYSYGMMLLEMVGGRKNINPEASHTSEIYFPHFAYRRLDVDIDVDNDVRPYEVMNAEEGEIAKRMTVVGLWCIQSLPSDRPTMSRVVEMLEGNMNSLEMPPKPLFSSPSRSET 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01454 588 SUPERFAMILY Protein kinase-like (PK-like) 272 566 IPR011009 -
Vian8g01454 588 FunFam PR5-like receptor kinase 363 577 - -
Vian8g01454 588 MobiDBLite consensus disorder prediction 101 135 - -
Vian8g01454 588 ProSiteProfiles Protein kinase domain profile. 288 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01454 588 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Vian8g01454 588 Gene3D Phosphorylase Kinase; domain 1 252 362 - -
Vian8g01454 588 SMART serkin_6 288 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01454 588 Pfam Protein kinase domain 291 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01454 588 FunFam serine/threonine-protein kinase PBS1-like 256 362 - -
Vian8g01454 588 Gene3D Transferase(Phosphotransferase) domain 1 363 575 - -
Vian8g01454 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Vian8g01454 588 PANTHER RUST RESISTANCE KINASE LR10-RELATED 258 584 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01454 Vian-Chr8 33893710 33901623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01454 254 581 Receptor kinase-like Gene Family AT4G18250 57.567 5.14e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vian8g01454 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01454 - - vra:106779094 868.226