Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01428 ATGCACGCGAAAACAGACTCTGAGGTAACAAGCCTCGCCGCGTCCTCCCCCACGCGCTCCCCTCCTCGCCGCCCTCTCTACTACGTCCAGAGTCCGTCCAGGGACTCCCACGACGGCGAGAAGACCGCCACGACATCGTTTCATTCCACCCCTGTTCTGAGCCCCGTTGCCTCTCCTCCCCACTCGCGGCAATCCTCCTCCACGCGCTTCTCTAAGAAGGATCACAGCCACAGTCTCAAGCCCTGGAAGCAGATCGATGTCATTGAAGAGGAAGGCCTTCTTCATGGTGATGATCGCCGCAATGGGCTCTCTCGTCGCTGCTACTTTCTCGCCTTTATTGTTGGGTTCCTGCTACTCTTCTCCCTCTTCTCACTCATCCTCTGGGGGGCTAGTAGACCCATGAAGCCCAAGATCTCCGTCAAGAGCATAAAGTTTGATGATCTCAGGGTACAAGCTGGATCAGATGCAACTGGTGTGACCACCGATATGATCACAATGAATTCCACTTTGAAATTCACGTACCGAAACACAGGCACGTTTTTCGGGGTCCATGTCACAGCCACACCCGTGGAACTCTCCTATTCAGACATCGTAATTGCTTCAGGCGATATGAAGAAGTTTTATCAATCTAGGAGGAGCCAAAGGTTGGTGAGTGTTGCAGTGATGGGTAACAAGATCCCTCTCTATGGAAGTGGTGCTAGCCTAAGTAGCACAACGGGTATGCCCACCGTGCCTGTGCCATTGAACCTAAAATTCGTGCTACGATCAAGGGCTTATGTTCTTGGGAAATTGGTGAAGCCTAAGTACTACAAAACCATTAAATGTTCCATCACTTTGGATCCCAAGAAGCTCACTTCGCCGGTTTCTCTCAAAAAATATTGCACATATGATTGA 894 0.5101 MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPSRDSHDGEKTATTSFHSTPVLSPVASPPHSRQSSSTRFSKKDHSHSLKPWKQIDVIEEEGLLHGDDRRNGLSRRCYFLAFIVGFLLLFSLFSLILWGASRPMKPKISVKSIKFDDLRVQAGSDATGVTTDMITMNSTLKFTYRNTGTFFGVHVTATPVELSYSDIVIASGDMKKFYQSRRSQRLVSVAVMGNKIPLYGSGASLSSTTGMPTVPVPLNLKFVLRSRAYVLGKLVKPKYYKTIKCSITLDPKKLTSPVSLKKYCTYD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01428 297 MobiDBLite consensus disorder prediction 43 66 - -
Vian8g01428 297 MobiDBLite consensus disorder prediction 1 77 - -
Vian8g01428 297 Pfam Late embryogenesis abundant protein 172 266 IPR004864 -
Vian8g01428 297 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 100 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01428 Vian-Chr8 33631153 33632835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01428 - - gmx:100817451 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04139 1 64414337 64415821 Vian8g01428 8 33631153 33632835 PCT