Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01426 ATGAGCGAAAGCTCAGAGACCCAGAAGCGTGAATCTGCTGATTCAAAGGGCGAGAAGGATGGTGTTGCATCCAAGAAGCCAAAGATTGAGTCTTGTGCAAAGGGTTCCGATGATAATGGTGTAAAGGAGCCATCTTTTCTCATTGAAGCGGATGCCGCCGAAGACAAGGGCTCGAGGCTCACGATGGAGGATGCGTGGGTTGTCCTTCTCGATGCAAGTTTAGATTATCCTGGAAAATTGAGATGTCAACATTTTGCAATTTATGATGGACATGGAGGGCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATAGGAATGTTCTTTCTGCAGGATTACCACGTGAGTTGTATGATGCAAAGGCAACTAAACGATCTATTCTGAATGGTTTTCTAAAAACTGATGAGTCTCTTCTTCAAGAAAGTGCTGAAGGAGGATGGCAGGATGGGGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAGAGTTGCAATTGCTCATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCACAAAATCCAGATGGTGTCCAGGCGCTGAAGGCCATTGTTCTGACTAGAGAACACAAACCTATCTTCCCACTGGAGCGTACACGCATTCAGAAGTCAGGGGGTTTTGTGAGCTCAGATGGACGATTATTAGGGCGTCTTGAAGTTTCTAGAGCTTTTGGAGATCGCCAGTTTAAAAAGGTAGGTCTTGTTGCAAGCCCTGATGTCTATACTTTTGAAGTTACAAATACTGAGCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGCGACGCTGTTGATTTTGTTCAGAAGTTATTGGATGAGGGGCTACCTGTTGCCACAGTGTGCCGTCGTCTTGTAAGGGAGGCTGTCCGTGAGCGTCGCTGTAAAGATAACTGCACTGCCATTATTATTGTATTTAAGCACAAATAA 972 0.4547 MSESSETQKRESADSKGEKDGVASKKPKIESCAKGSDDNGVKEPSFLIEADAAEDKGSRLTMEDAWVVLLDASLDYPGKLRCQHFAIYDGHGGRLAAEYAQKHLHRNVLSAGLPRELYDAKATKRSILNGFLKTDESLLQESAEGGWQDGATAVCVWVLGQRVAIAHIGDAKAVLARSTDGSQNPDGVQALKAIVLTREHKPIFPLERTRIQKSGGFVSSDGRLLGRLEVSRAFGDRQFKKVGLVASPDVYTFEVTNTEHFIILGCDGLWGVFGPSDAVDFVQKLLDEGLPVATVCRRLVREAVRERRCKDNCTAIIIVFKHK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01426 323 CDD PP2Cc 53 320 IPR001932 -
Vian8g01426 323 PANTHER PROTEIN PHOSPHATASE 2C 23 318 IPR015655 GO:0004722|GO:0006470
Vian8g01426 323 MobiDBLite consensus disorder prediction 1 37 - -
Vian8g01426 323 Pfam Protein phosphatase 2C 54 308 IPR001932 -
Vian8g01426 323 Gene3D - 25 323 IPR036457 -
Vian8g01426 323 SUPERFAMILY PP2C-like 46 321 IPR036457 -
Vian8g01426 323 SMART PP2C_4 35 318 IPR001932 -
Vian8g01426 323 ProSiteProfiles PPM-type phosphatase domain profile. 49 320 IPR001932 -
Vian8g01426 323 MobiDBLite consensus disorder prediction 1 41 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01426 46 272 PP2C-type Phosphatase Gene Family AT1G18030 71.304 4.58e-119 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01426 K17500 - gmx:100815852 550.821