Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01425 ATGGCTAGTGTTGTGACAGAGAAAGTGAAGCTTCTTGTGGCATTACTTACCCTGCAGCTCTGCTTTGCAGGATATCACATTGTGTCTAGACTTGCACTAAATATTGGAGTCAGCCAAGTTGTTTACCCCGTTTATCGAAATTTGATTGCTTTGCTTTTGTTAAGCCCATTTGCTTATGTGTTAGAGAAGAATCAAAGACCACCCCTCACTTTATCTTTACTTGTTCAGTTCTTCCTACTTGCATTACTGGGGATCACAGCAAACCAAGGGTTTTACTTGCTGGGATTATACTATGCTTCTCCAACTTTTGCTTCTGCATTGCAAAACTCAGTTCCTGCAATCACTTTTGTCTTGGCTTTGGCTTTAAGGCTTGAGGAAGCCAACATCACAAGGAGAGATGGATTGGCAAAAGTTCTTGGAACCATTGCTAGTGTGGGGGGTGCCACAGTAATTACTCTTTACAAAGGTCCTCCTCTTCTTCACCTGCAGATGGACCTAGCACAAGGAGACACTTTAGAAGTAGATCAATCAACAAAAACGCAAAATTGGAATTGGGGCTGCATATACTTGCTTGGACATTGTCTGTCATGGGCTGGCTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCAAAACTAACCCTCACTTCGTTTACATGCTTCTTTGGATTGATCCAGTTCTTGATCATAGCAGCCTTTGCAGAAGATGACTTGGAGAATTGGAAGATACAGTCACTAGAGGAGCTTTTTATTATCCTATATGCTGGAATTATAGCATCTGGTGTTGTCATATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGTCTTCCAGCCTGTGCAAACTATTCTAGTTGCTGTCATGGCAGCCCTAATTCTTGGTGATCAGTTATACTCAGGAGGGCTTATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTAGTCCTATGGGGCAAAACCAACGAAAAAAAAGTGAGAGAGTCATCACCATCACTAACAAACCCCTTGCTTAAGGCAGAGGAAGAGAATAAAGAAATTGATGCAGCTTCTAAGGACATACCATGA 1086 0.4217 MASVVTEKVKLLVALLTLQLCFAGYHIVSRLALNIGVSQVVYPVYRNLIALLLLSPFAYVLEKNQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASALQNSVPAITFVLALALRLEEANITRRDGLAKVLGTIASVGGATVITLYKGPPLLHLQMDLAQGDTLEVDQSTKTQNWNWGCIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFAEDDLENWKIQSLEELFIILYAGIIASGVVISLQTWCIQKGGPVFVAVFQPVQTILVAVMAALILGDQLYSGGLIGAILIVLGLYLVLWGKTNEKKVRESSPSLTNPLLKAEEENKEIDAASKDIP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01425 361 MobiDBLite consensus disorder prediction 333 361 - -
Vian8g01425 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Vian8g01425 361 Pfam EamA-like transporter family 14 152 IPR000620 GO:0016020
Vian8g01425 361 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Vian8g01425 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Vian8g01425 361 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0016020|GO:0022857
Vian8g01425 361 MobiDBLite consensus disorder prediction 345 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01425 Vian-Chr8 33596713 33598655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01425 4 355 Nodulin-like Gene Family AT3G18200 67.227 4.19e-175 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01425 - - vra:106768622 651.744