Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01416 ATGTGGATGGTTGGTGACAACGAAGGTGGTGAGTTCAGTATGGTTGATCATTCTTTCAATGGAAGGAAACTCAGGCCCCTCATGCCAAGGCCAATGATTTCTTCTAACACTGCACCACCAACAACCACTCTTAGCTTAACTCACCACCATGGCAATGATTTCCCTTCACAATATGATTATCACCATCTTGCCTCAGTGGCAGAACAAAACAAGAGAGAGCAGTTCAATGGTGCAGCACCTGTTGTGGTGAGCTCAAGGTGGAATCCAACCCGAGAGCAACTGAGAGCCCTTGAAGAGTTGTATAGAAGAGGAACAAGGACACCGTCTGCTGAGCAAATCCAACATATCACTTCACAGCTTAGAAGGTTTGGTAACATCGAAGGCAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGGGAAAGGCAAAAACGTCGCCGCCAAATGGAATCAGAGGCTGAAACTCCTGAGAAGAAAGAGTCAGCTGCAAGTAGGGCAGTTTTTGAAGTTAAACAGACCAAGAATTGGACACCCTCAACAAACTGCAGTACTGTTGCAGAGCATATGATTACTAGAGATGAAGTTGATGTTGGAAATATGTATATTATGGAAAGATCTGCACTAGAGATAGATACTGTGGTTTTCAATTTGATGCGTTTGCATGGCTGCAATTCAAATCCACAGGAATCTGTTTCAACACAGAGGACTGCAAAAGCAGTGGCCGTAGAGAGTAGAACAGTTGGATGGTTCCAATTCGAGGAAGGGGAATTACAAGAAAGAAGAAACCTTTTGGAGAGGAATGCCACGTGGCATGTGATGCAGTTACCTTGTCCTTCTCCTGCTGCAGCTGTCACAGACCTCATAAACAGCCCTCCTAACACCTCTTCAGCTATTAGTATGGCTACTACAACAACTACAGTAACAACAACAAAAATGGACCCTAACCTCATAAAGACACATGATCTCAGCTTTTTCATTTCACCCCAGAGGGAAAACAGTGTTATATACTTAAGCAGTAGCAGTAGTACTAGCGAAGATGATAACTGTGTGGAGTCTCAAACCCTTCAGTTTTTCCCATTAAGGAGTGGTGGTGATGTTAGCAGTGACAACATGAGGGATAAAGAGACAGAGATATCAGCTTCAGCAATGAATTGCAATAACTTGACCCCAAGCCAGTTTTTTGAGTTCCTTCCTATGAAGGAGTAA 1209 0.4342 MWMVGDNEGGEFSMVDHSFNGRKLRPLMPRPMISSNTAPPTTTLSLTHHHGNDFPSQYDYHHLASVAEQNKREQFNGAAPVVVSSRWNPTREQLRALEELYRRGTRTPSAEQIQHITSQLRRFGNIEGKNVFYWFQNHKARERQKRRRQMESEAETPEKKESAASRAVFEVKQTKNWTPSTNCSTVAEHMITRDEVDVGNMYIMERSALEIDTVVFNLMRLHGCNSNPQESVSTQRTAKAVAVESRTVGWFQFEEGELQERRNLLERNATWHVMQLPCPSPAAAVTDLINSPPNTSSAISMATTTTTVTTTKMDPNLIKTHDLSFFISPQRENSVIYLSSSSSTSEDDNCVESQTLQFFPLRSGGDVSSDNMRDKETEISASAMNCNNLTPSQFFEFLPMKE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01416 402 SMART HOX_1 82 149 IPR001356 GO:0003677
Vian8g01416 402 MobiDBLite consensus disorder prediction 143 165 - -
Vian8g01416 402 MobiDBLite consensus disorder prediction 146 165 - -
Vian8g01416 402 ProSiteProfiles 'Homeobox' domain profile. 90 145 IPR001356 GO:0003677
Vian8g01416 402 SUPERFAMILY Homeodomain-like 85 150 IPR009057 -
Vian8g01416 402 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 68 397 IPR044555 GO:0003700|GO:0099402
Vian8g01416 402 FunFam WUSCHEL-related homeobox 4 84 151 - -
Vian8g01416 402 Pfam Homeodomain 85 144 IPR001356 GO:0003677
Vian8g01416 402 Gene3D - 83 145 - -
Vian8g01416 402 CDD homeodomain 86 146 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01416 Vian-Chr8 33479891 33482099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01416 1 401 Wox Gene Family AT3G18010 37.355 1.35e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian8g01416 Homeodomain 3.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01416 - - gmx:100819541 531.946