Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01410 ATGCCTTCCATTGTAGATTTGCAACTTCAAGGAACATCAATCTCAGGTAGTGGTTCGTGGGAAGCTGTCTTGGTTAATAGGGCTGCTGATTCAAACTTGTTGAAACTTGTGCAAAAGGCCCAGGAGTTGACTGGCAAATCAAGTTCAGATTTTGAAGTTATAGATAGCAATTTGGTTCGCAAGCTTGCAATATTTGTGGCTGACTATATGGGTGGACAAGTTGGAGATCCTGAAAGTATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTCAAAGCAACCCTTGGTAGCATGTTTTTGCCACTTGGTTCTCTAACTATTGGATTGTCTCGGCATCGTGCATTGTTATTTAAGGTTCTAGCTGATAATTTGGGCATCCCATGTCGATTGGTGAAGGGGCTGCAATATACAAATTCCGATGACGTGGCAATAAACTTTGTCAAGATTGATGATGGAAGGGAGTACATCGTTGATCTAATGGCGGATCCTGGAACTCTTATTCCATCTGATGCAACTGGATCACAGGTAGAGTGTGATGAATCGTCGTATGTGGCCAGTCCTTCATCTAGAGACCTTGATTCCTCACATGTAGCATCATCCAGCAGTGGTGTTGGAAGTTCATACGAAGAAACTTTGGATTTGGGGATGTTGGACAAAGCAAACAGATCAAAACATTTTACTCATACAGGTAAAGAATCTGATGTAAGCATGCCCTCCACGGTAAAGGAAGAATCAATGCAACCCTTGAATGAATTTAAAAGCCGTCACAATGTTGAGAAGATCACTGAGCAGGAAGCTCATGGCAGACCTAATCATCCACATGTACATGCAAGATCTCCATCTTGGACTGAAGGGATCAGTTCTCCCGCAGTACGTAAGATGAAAGTCAAAGATGTTTCTCTATACATGATCGATGCTGCAAAGGAGAATCCTCACTTAGCCCAGAGACTTCATGATGTTTTACTTGAAAGTGGTGTGGTTGCTCCTCCAAATCTATTTTCTGAAATTTGTGATGATGACTCAAGTTCCTCAACTGAGGCCAACTTTCCAATAGAAGAAAAATATGAACATAAGCTGGGAAGTGGACATAAAGAAGCCGAACTTGATGGTAATATTTTTCAAGCTCGAATTTTGCCTCCTTTGGCTCAAAATAGAGTCCAGAACAAAACAAGTTCTAGTGGTCAGGTGGAGCATTCTAGACCTGTAGAAGGTTTAGGAATCAACCTTCCTCTTTATACAAGGGAACCAGCTGTACAGCACGTACAACCTCAGGTAAAATATGGTCAAAATGTACCTGTTGCTGCTGCAGCAGCCGCCGCCGCCGCTGTTGTTGCATCTTCTATGGTAGCTGCAGTGGCAAAATCTAGCATTGACTCAAACATAGATTTTCCTGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCTGCTGTCAGTAAACAGTATGAGCAAGGCAGTCGAAGTGATGGAGATACAGACAGTGCTGGTTATGACCTGAAGGGTAGCGGTGATGGAGAACATATAGCTTTAGGAGCAAATTCAGAAGGTGAGCGAAGATCTGATAGATCAGTAGTCAGTAATGATAGCACAAAATCTGATTCTGCATTAGATGATCAAGATGTTGCTGAGGTTGACATTCCATGGGAGGAAATCTCAGTCGGGGAGCGTATTGGACTTGGATCATATGGGGAGGTGTATCGTGGTGAATGGCGTGGAACAGAAGTTGCTGTAAAGAGGTTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAGTTCAAAACTGAAGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTACTTCATAGACTAAACAGTCAGCTAGATGAGCGAAGGCGTTTGAAGATGGCTATTGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATAGTGCATCGGGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTGAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGTACGTTCCTTTCTTCTAGATCAACTGCTGGAACAGCTGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCTTCAAATGAGAAGTGTGATGTATATAGCTTTGGGGTCATATTATGGGAGCTCTCTACTCTGCAGCAACCCTGGGGTGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAGCATCGCCGTCTTGACATTCCTGATAATGTGGACCCTACCATAGCAGATATTATCAGGAAATGCTGGCAAACAGATCCAAAGTTGAGACCTTCATTTGTTGAAATATTGGCGGCTCTGAAGCCATTACAGAAGACAGTGATTGGTTCTCAAGTGCCTAGACCAAGTGCATCGGGGAAGCATGAGAAGGGTCAGTCATCGCGTGTTATAGAAGACCCAGCAAGATAG 2532 0.4313 MPSIVDLQLQGTSISGSGSWEAVLVNRAADSNLLKLVQKAQELTGKSSSDFEVIDSNLVRKLAIFVADYMGGQVGDPESMTRAWRSLSYSLKATLGSMFLPLGSLTIGLSRHRALLFKVLADNLGIPCRLVKGLQYTNSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSQVECDESSYVASPSSRDLDSSHVASSSSGVGSSYEETLDLGMLDKANRSKHFTHTGKESDVSMPSTVKEESMQPLNEFKSRHNVEKITEQEAHGRPNHPHVHARSPSWTEGISSPAVRKMKVKDVSLYMIDAAKENPHLAQRLHDVLLESGVVAPPNLFSEICDDDSSSSTEANFPIEEKYEHKLGSGHKEAELDGNIFQARILPPLAQNRVQNKTSSSGQVEHSRPVEGLGINLPLYTREPAVQHVQPQVKYGQNVPVAAAAAAAAAVVASSMVAAVAKSSIDSNIDFPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDTDSAGYDLKGSGDGEHIALGANSEGERRSDRSVVSNDSTKSDSALDDQDVAEVDIPWEEISVGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLLHRLNSQLDERRRLKMAIDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPTIADIIRKCWQTDPKLRPSFVEILAALKPLQKTVIGSQVPRPSASGKHEKGQSSRVIEDPAR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01410 843 MobiDBLite consensus disorder prediction 263 285 - -
Vian8g01410 843 MobiDBLite consensus disorder prediction 227 247 - -
Vian8g01410 843 ProSitePatterns Protein kinases ATP-binding region signature. 562 583 IPR017441 GO:0005524
Vian8g01410 843 FunFam Serine/threonine-protein kinase CTR1 635 818 - -
Vian8g01410 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Vian8g01410 843 PRINTS Tyrosine kinase catalytic domain signature 716 726 IPR001245 GO:0004672|GO:0006468
Vian8g01410 843 PRINTS Tyrosine kinase catalytic domain signature 779 801 IPR001245 GO:0004672|GO:0006468
Vian8g01410 843 PRINTS Tyrosine kinase catalytic domain signature 735 757 IPR001245 GO:0004672|GO:0006468
Vian8g01410 843 PRINTS Tyrosine kinase catalytic domain signature 630 643 IPR001245 GO:0004672|GO:0006468
Vian8g01410 843 PRINTS Tyrosine kinase catalytic domain signature 669 687 IPR001245 GO:0004672|GO:0006468
Vian8g01410 843 Pfam Protein tyrosine and serine/threonine kinase 557 807 IPR001245 GO:0004672|GO:0006468
Vian8g01410 843 MobiDBLite consensus disorder prediction 516 531 - -
Vian8g01410 843 Pfam Ethylene-responsive protein kinase Le-CTR1 1 167 - -
Vian8g01410 843 SUPERFAMILY Protein kinase-like (PK-like) 542 807 IPR011009 -
Vian8g01410 843 SMART serkin_6 556 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01410 843 MobiDBLite consensus disorder prediction 232 247 - -
Vian8g01410 843 MobiDBLite consensus disorder prediction 817 843 - -
Vian8g01410 843 MobiDBLite consensus disorder prediction 185 207 - -
Vian8g01410 843 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 238 812 - -
Vian8g01410 843 CDD STKc_MAP3K-like 562 808 - -
Vian8g01410 843 Gene3D Transferase(Phosphotransferase) domain 1 635 819 - -
Vian8g01410 843 Gene3D Phosphorylase Kinase; domain 1 549 633 - -
Vian8g01410 843 ProSiteProfiles Protein kinase domain profile. 556 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01410 843 MobiDBLite consensus disorder prediction 485 543 - -
Vian8g01410 843 FunFam Serine/threonine-protein kinase isoform 1 547 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01410 Vian-Chr8 33411713 33418873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01410 7 826 MAP Kinase Kinase Kinase AT1G73660 63.285 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vian8g01410 PK_Tyr_Ser-Thr 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01410 - - vra:106769971 1561.97