Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01391 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAAAAATCCGATTCCTCTAGCCCCGATGCGTCATCCAACAGTCCTCGATCTTTCTCCTCCAATTCCCCTTCCAGATCCGACAAGAAGAAGGCTAAATCCGCCGCCCATCCAACTTTAGCAGCCGGAGGCGGCGGTGGAAGCGGCGGTGGTGGAGCTCTTGCTGCGTGTCGTCAGACGCAGGTGAAAGACGGGACCAAGAAGAAGGATGTGGTCAAGGGGAAGGAAAGTCAAACTCCGCCGCCGGAAGCTCGCAAGGATTCTCCGGTGAAGAAGTTGACGGCGGCGGAGGGACGGGAGTCGTCGGTGTCGCCGATTCTGGCGTCGTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGACCGCTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGAACGACGGCGCTAGGCGGCAGCAATCTCTCCCGTCCCGGTGTCGGCGTGCGCGGCGGCGATGGGAAGAAGAAGGAACCGGCCAGCCAGAACAGGGTCGGGTTTCGTGAGGGTTCCCATGGCGGTGCCAGTGCTACCGGAGGGTGGGGCGATAATGGGAGCAATTCTGATAGCGTGTCGACCTTGGGGAGTATGCCGCCAAGGGAGCAGAGTCCGGTGGTGTTGCCTCGGTCGCGGTTGCAGAACGGAGAATCGTCCTCGGAAGCCGCAGGCAAGCAGGCATCATCATGGGCTCAGTCTGGAGGCTTAAGAAGTGCAGATGTTTGTACTCCAGAGACGGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGCTTTCAAGCCATATTACGTGTCACTAGTGCACCTAGAAAGAGGTTTCCTTCGGATATCAAAAGTTTTTCCCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCTCGGCGGTTGAATAACCTTGAGGAGATTTTGGTCGTTATTAGGGCAAAATTTGATAAAGCGAAGGAAGATGTGAACTCTGATTTAGCCATTTTTGCGGCAGATCTTGTAGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCAAGGAGTTGTGCTATGACTTCATCTGGCGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCTGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTATTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAGCCTGTTTTCAATCTTCGTCAATCAAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATGCTAAAAGTTCAAGTGCTGCAAAAGCCTTAAAGCCTTCATCTAAAAAAGCTTTTAGTCAAGAACAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCGGAAAATCTTTCACTTCCTGCTGATGATGATAATACAAAACATTTTGACTCTTCAGGCAGGGATCGAATGGCTTCTTGGAAGAAATTCCCATCTCTGTCTGGAAAAAGCCCTAAAGAAGCTGCTCAGTTGAAGGACCAAAATTATGGGAGGGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCCCTTCTGATGTGGACCTTTCTACTGCAAAGCCATCTGAGTTTCTTCCTATCAAAGATTCCTTGGATCATGCTTCCAAACACCAACATAAAGTTTCTTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAACTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGATCATTCGAGGATTTGTGCAGTTGCTGATAGATGTGATCAGAAGGGACTGAGTGTCAATGATCGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAGTCTTGTTCACAAAAGGATACCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTATCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGATGACATGCTAGACTGTTTCCCCGAAACTGATAATTCTGCTTTTATGGATGACCTGAAAGGATTACCACTTATATCATGCAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCAAGGTCACCATTGATGACACCGCGGACAAGTCAGATTGACTTGCTCTTGGCCGGGAAGGGTGCTTATTCTGAACATGATGATCTGCTGCAGATGAATGAACTTGCTGATATAGCTCGATGTGTGGCAAATGCACCTCTGGACGATGATCGCACAACTTCATATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTCGGAACACGTATTGAGAAGCTGATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACAGTTGATGATGATGTTCTTTTGGAAGATGACGTGGTTCGTAGTTTGAGAACAAGCCCAATCCATTCATCAAGGGATCGTACCTCTATTGATGACTTTGAAATTATAAAACCTATCAGTCGTGGGGCATTTGGGAGGGTTTTCTTGGCTAAAAAGAGAACAACCGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGTAAAAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAATCCTTTTGTGGTTCGATTCTTCTATTCTTTTACATGTCGTGAAAACTTATATCTTGTTATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGAAATTTAGGTTGCCTAGACGAGGAAGTTGCTCGAGTATATATTGCTGAAGTGGTGCTTGCGTTAGAGTATTTGCATTCCCTGCATGTGGTTCATCGAGATCTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGCCCAGCAGTGAATGGGACATCCCTACTTGAAGAGGATGAGGCTGCTGATGTATTTACATCTGAGGATCAATGGGAAAGGAGGAAAAAACGCTCTGCAGTGGGCACGCCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGCGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCCGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAAATACCTTGGCCTTCAGTTCCTGCAGAGATGAGTCCTGAATCACAGGATCTCATTGATCGACTATTGACAGAAGATCCTAATCAGAGACTGGGATCTAAAGGCGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGCGCTCTGGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCCAGCCAGTGATGTTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAGGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTCAGTAATTTCTCCTTCAAGAACCTCTCCCAGCTTGCATCTATCAACTACGATCTCACTAAAGGATGGAAAGATGATCCTCCGACGAATTCTAGTGCATAG 3894 0.4566 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGGGGSGGGGALAACRQTQVKDGTKKKDVVKGKESQTPPPEARKDSPVKKLTAAEGRESSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEPASQNRVGFREGSHGGASATGGWGDNGSNSDSVSTLGSMPPREQSPVVLPRSRLQNGESSSEAAGKQASSWAQSGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDAKSSSAAKALKPSSKKAFSQEQSMMGWKKDVMQPENLSLPADDDNTKHFDSSGRDRMASWKKFPSLSGKSPKEAAQLKDQNYGRVESSKASNNKRFPSDVDLSTAKPSEFLPIKDSLDHASKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNDRLVRIAETLEKMMESCSQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSDDMLDCFPETDNSAFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLLQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLHVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDEAADVFTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPSVPAEMSPESQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01391 1297 MobiDBLite consensus disorder prediction 71 103 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 9 32 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 1 249 - -
Vian8g01391 1297 SUPERFAMILY Protein kinase-like (PK-like) 882 1214 IPR011009 -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 540 558 - -
Vian8g01391 1297 ProSiteProfiles AGC-kinase C-terminal domain profile. 1176 1280 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vian8g01391 1297 PANTHER SERINE/THREONINE-PROTEIN KINASE 586 1269 - -
Vian8g01391 1297 Coils Coil 313 333 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 466 480 - -
Vian8g01391 1297 Pfam Protein kinase domain 885 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01391 1297 MobiDBLite consensus disorder prediction 500 516 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 654 692 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 455 561 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 192 211 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 219 247 - -
Vian8g01391 1297 ProSiteProfiles Protein kinase domain profile. 885 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01391 1297 MobiDBLite consensus disorder prediction 1225 1242 - -
Vian8g01391 1297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1004 1016 IPR008271 GO:0004672|GO:0006468
Vian8g01391 1297 FunFam probable serine/threonine protein kinase IREH1 883 972 - -
Vian8g01391 1297 SMART serkin_6 885 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01391 1297 MobiDBLite consensus disorder prediction 654 685 - -
Vian8g01391 1297 Gene3D Transferase(Phosphotransferase) domain 1 969 1193 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 729 751 - -
Vian8g01391 1297 MobiDBLite consensus disorder prediction 1220 1243 - -
Vian8g01391 1297 CDD STKc_MAST_like 891 1180 - -
Vian8g01391 1297 Gene3D Phosphorylase Kinase; domain 1 883 1204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01391 Vian-Chr8 33084694 33105009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01391 1 1291 AGC Kinase Gene Family AT3G17850 65.165 0.0 1609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Vian8g01391 Pkinase 2.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01391 - - gmx:100776995 2252.63